Methanochimaera problematica: F1737_02165
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Entry
F1737_02165 CDS
T09667
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
mefw
Methanochimaera problematica
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mefw03000
]
F1737_02165
Transcription factors [BR:
mefw03000
]
Prokaryotic type
Helix-turn-helix
Other families
F1737_02165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7839
HTH_24
MarR_2
MarR
HTH_Crp_2
DUF8462
HTH_45
HTH_11
HVO_A0261_N
DUF7343
WHD_phage_rep
Rrf2
Mnd1
HTH_23
HTH_IclR
Fe_dep_repress
HTH_3
HTH_10
HTH_13
TrmB
HTH_5
GntR
NirdL-like_HTH
HTH_1
TFIIE_alpha
YdaS_toxin
HTH_Mga
WHD_RNase_R
KORA
Sigma70_r4_2
HTH_20
Sigma70_r3
FilR1_N
HTH_28
WHD_RecQ_mid_bact
HTH_Cmi2_C
Phage_rep_O
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
WOF15571
UniProt:
A0AA97I3T1
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All DBs
Position
445009..445818
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AA seq
269 aa
AA seq
DB search
MKAKENDPLYIILRSKREATKFQILVEVAEHQPSVRQQEIAEKLGITPQAVSEYIRELVD
DEMVRSQGRGSYTITHKGVEWVINNAEALESYAKHVTRDIVQQVSVWTAIADCNIRSGDL
VGVYMKDGFLRASYREKSAMGKAIASAKGGMDIGISNLTGIIDHSYGLVHVCKVPRIQRG
GSQKVSAEILRDTLEKVSYVGAVGIEADIAVKNAGMEPDIYFGAREGVIEGAIHGMECAL
VIVDEDFTDFLKRLETSGLRYVIHDLITP
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcaaaggagaatgatcctttatacattattctcagaagcaaaagggaagcaaca
aaatttcagattcttgtagaagttgccgaacatcagccttcggttcgtcagcaggaaatt
gcggaaaagctggggataaccccgcaggcagtttccgagtatatccgtgaacttgtggat
gacgagatggtcagatcccagggcagaggcagctatactataacacacaagggcgttgaa
tgggttatcaataatgctgaagcgcttgaatcatatgcaaaacacgttacaagagacatt
gtgcagcaggtttctgtatggacagcgatagctgactgtaatattcgcagcggtgatctt
gtcggtgtatatatgaaagacggattcctgagggcatcttaccgggaaaaaagtgctatg
ggtaaagcgatagcaagtgcgaaaggcggtatggatattggcatatccaatctcaccggc
attatcgatcattcatatggccttgtacatgtatgcaaggtgcccagaatacaaagaggc
ggttcccagaaagtatcagctgaaatcttaagggatactctggaaaaagtcagttatgtc
ggcgcggttggcattgaggctgatattgcagtcaaaaatgcaggtatggaaccggatata
tatttcggagcacgtgaaggagtaatagaaggtgcaatacatggcatggagtgtgcactt
gtaatagtagatgaggattttactgattttctaaaaaggcttgaaacatccggtctgcgt
tatgtaatccatgatttgatcactccatga
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