Methanochimaera problematica: F1737_02360
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Entry
F1737_02360 CDS
T09667
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
mefw
Methanochimaera problematica
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mefw03009
]
F1737_02360
Ribosome biogenesis [BR:
mefw03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
F1737_02360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
Fer4_RLI
AAA_21
Fer4
Fer4_6
Fer4_21
RsgA_GTPase
Fer4_2
Fer4_7
Fer4_10
MukB
Fer4_9
VapE-like_dom
Fer4_4
AAA_29
Fer4_16
AAA_16
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
WOF15608
UniProt:
A0AA97FCN5
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All DBs
Position
480968..482743
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AA seq
591 aa
AA seq
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MRIAVVHKNRCHSKKCGKECILYCPRVRTGDETIVIGENGKAVISEELCVGCGICVKKCP
FEALDIITLPQELDYPTHRYGQNGFALYGIAIPLEGKVTGILGANGIGKSTAVGILSGQL
IPNLGNIEEEPTWEGILKEYTGTELYDYLNMVAGGNVKVAVKPQYIDHIPKVFKGKVRDL
LSSADERGVLESYAAELKLEAILDREIGKISGGELQRIALAACLSRNADFYFLDEITPYL
DIYQRMAAAKLIREVAEEKPVMIVEHDLAILDMLADNVHVAYGKPSVFGIITRPKGVRVG
INQYLEGFLPEENVRFRDYSVTFETRAHTRDSDRQTLFEFPAMSKSYDGKFTLNVRGGDI
KAGEVLGLVGANGIGKSTFAKLLAGAEKPDNGELETTLKVAYKPQYIKSDSSDTVEFLLR
RTTSRFDTSYYQHEIIEPLSLDTIMQSQVDHLSGGELQRVAIALCLSQSADLYILDEPSA
HLDVEQRVKLARVLRRHAEGSESGVLVIDHDIYLIDMISERLFVFDGQPGVSGEAVGPFD
MKDGMNYFLKELEVTFRRDKSGRPRINKPGSYLDREQRSIGEYYYADISKT
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagcagtagttcataaaaacagatgccattccaaaaaatgcggtaaagaatgt
atattatactgcccgcgtgtaagaaccggtgatgaaacaattgttatcggtgagaacgga
aaagcggtaatttcagaggagctttgtgtgggttgtggtatttgtgtcaaaaaatgcccg
tttgaggctctggatataatcactctcccccaggaactggactatcccacccacaggtat
ggtcagaatggttttgcactctatggaatagcgataccacttgaaggaaaagtaacaggt
attcttggtgcaaacggtatcggtaaaagtacggcggtcggaatattatcaggccagctg
atacctaatcttggaaatattgaggaagagcccacgtgggaagggatattaaaggaatac
accggaaccgagctttatgattatctgaatatggttgccggaggcaatgtaaaagttgct
gtcaaaccccagtatatcgatcacatcccaaaggtattcaagggaaaggtaagggatctc
ctatcttcagcagatgaaagaggcgtccttgagagctatgcggcagaacttaagcttgaa
gcaatacttgacagggaaattggaaaaatatccggtggagaacttcagcgcattgcactg
gccgcctgcctttcacgtaatgcggatttttatttccttgatgaaattactccttacctt
gatatatatcagagaatggcagctgcaaaacttatccgcgaggttgcagaagaaaaacct
gtcatgattgtagagcacgaccttgcgatacttgatatgcttgcagataatgttcatgtt
gcatacggaaagccctcggtttttggtataatcacaaggccaaaaggtgtcagagttggt
ataaaccagtatcttgaaggtttccttcctgaagagaatgttcgtttcagggattattcg
gtaacctttgaaacaagagctcatacgcgtgattccgacagacagactctgtttgaattc
cctgcaatgagtaaaagctatgatggcaaatttacattgaatgtcagaggcggggatatc
aaagccggagaagttctcggacttgttggtgcaaacggtattggaaagagtacttttgca
aaacttcttgcaggtgccgaaaaacctgacaatggggagcttgagacaacactaaaggtt
gcatataagccccagtatattaaatccgactcatccgatacggttgaatttcttttaaga
agaacaacaagcaggtttgacacttcctattaccagcatgagataatcgagcccctgtcc
cttgatacgatcatgcagtcacaggttgatcatctctccggtggagagcttcaaagggtt
gcaatagcactttgtctttcccagagtgcagacctgtatattctggatgaaccaagcgca
caccttgatgtcgaacagcgtgtgaaactagcccgtgtattaaggcggcatgcggaaggt
agtgagtcgggtgttttggtaattgaccatgatatctatctaatagacatgataagtgag
cgtctttttgtatttgacgggcagcccggcgtatccggagaggctgtcgggccttttgac
atgaaagacggcatgaactatttcctcaaggaactggaagttactttccgcagagataag
agcggaagacccagaataaacaaacccggaagctatttggatcgtgagcagcgttccatt
ggcgaatactattatgctgatattagcaaaacataa
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