Methanochimaera problematica: F1737_04915 Help Entry F1737_04915       CDS       T09667                                  Symbol uvrA Name (GenBank) excinuclease ABC subunit UvrA   KO K03701   excinuclease ABC subunit A Organism mefw  Methanochimaera problematica Pathway mefw03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:mefw00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     F1737_04915 (uvrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mefw03400]     F1737_04915 (uvrA) DNA repair and recombination proteins [BR:mefw03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      F1737_04915 (uvrA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       F1737_04915 (uvrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_21 AAA_23 AAA_15 AAA_14 nSTAND3 AAA_25 nSTAND1 AAA_18 AAA_33 RsgA_GTPase ATPase AAA_22 DnaJ_CXXCXGXG SLFN-g3_helicase T2SSE BCA_ABC_TP_C Motif Other DBs NCBI-ProteinID:  WOF16093 UniProt:  A0AA97I2Y5 LinkDB All DBs Position 965030..967849 Genome browser AA seq 939 aa AA seqDB search MDKLVIRGAREHNLKNISVELPRDKLIVITGVSGSGKSTLAFDTIYAEGQRRYVESLSAY ARQFLGLMNKPDVDSIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLYARVGIPYC PEHNIIIESRSPEKIADSIKDDFSGMVTILAPVIRQKKGTYQHVLKELDSEGFTRARVDG EIIRTDEEINLERYVKHDIDVVIDRLEPGEDRSRLVEAVENALLKSEGLLIVSGENDTEK MYSSRMACPVCGISFEELQPRMFSFNSPFGACEECNGLGIKMEFDAELIIPDKSKSLSEG AVAMYRNFLDGFRVQYLAAVAKHYGFDIFTPLKDLTKEQYNALVYGSDDSIRFNMKMKGG DAFWSHNGKWEGLIPQAARLYGQTKSEYRKKELEKFMRISVCPKCGGKRLKDKVLSVKVA DKSIIDVTDLSISKSLEFFEDLSLSRKETDIAKQVLKEIKSRLLFLNEVGLGYLTLSRTA GTLSGGEAQRIRLATQIGSNLMGVLYVLDEPSIGLHQRDNHKLIETLQKLRDLGNTLVVV EHDEDTIREADYVVDIGPGAGVHGGNIVALGTPEEIEANPDSLTGKYLSGTEIIEIPKKR RKSDSFIHITGCSENNLKSVDAHIPIGLLTLITGVSGSGKSTLVYDTLYRALMKTVNDSK TSPGKYEKLEFDSEIDKVIVIDQSPIGRTPRSNPATYTKVFDEIRKIFAETKEAKLRGYK PGRFSFNVKGGRCEACNGDGLIKIEMNFLPDVYVECEECKGTRYNAETLEVKYKGKSISD VLNMTVEEAYYLFENIPSIKNKLETLCRVGLGYVKLGQSSTTLSGGEAQRIKLTRELSKK GTGKTIYLLDEPTTGLHFHDVKKLIQVLNSLVDKGNTVVVIEHNLDVIKSADHIIDLGPE GGDMGGEIIATGTPEQVAENMKSYTGHFLAYMMKKETKK NT seq 2820 nt NT seq  +upstreamnt  +downstreamnt atggataaattagtaatacggggagcaagggaacacaacctcaaaaatatttccgtagag ctcccaagagacaaactgattgtaataacaggagtttcaggctcaggaaaatctactctg gcatttgatacgatatatgcggagggtcagcgaaggtatgttgaatctctctctgcttat gcaagacagtttcttggtttaatgaataaacctgatgttgattcaatagacggcctttca cctgcaatttcaatagaacagaaaacaacctctaaaaatccgagaagtactgtcgggact gtcactgaaatatatgattaccttcgtcttttgtatgcgagggtaggtattccgtattgt cctgaacacaatattataattgagtcaagatctcctgaaaaaattgcagactcgataaaa gatgacttttcaggaatggttacaatacttgcacctgtaatcaggcagaagaaaggcact taccaacatgtcttaaaagaacttgacagtgaagggtttacaagagcaagagttgacggg gaaatcatccggactgatgaagagatcaatcttgaaagatatgtcaagcatgatatcgac gttgtcatcgacagacttgagccgggagaagacagatcaaggcttgttgaagcagttgaa aatgctcttttaaaatctgagggacttttgatagtttcaggagagaatgatactgaaaag atgtattcctcccgtatggcatgtcctgtttgtgggatctcctttgaggagcttcagccg agaatgttttcattcaacagtccttttggtgcatgtgaggagtgcaacgggcttggaata aagatggagtttgatgctgaactaataattccggataaatcaaaatcactctccgaaggg gcggttgcaatgtacagaaatttccttgacggattcagggttcagtatttggctgccgtt gcaaaacattacggatttgatatattcactccgttaaaggatcttacaaaagagcagtat aatgctcttgtatatggatcggatgattctatacgctttaacatgaagatgaagggaggg gatgcgttctggtcacataacgggaaatgggaagggttgatccctcaggcagcccgtctt tatggtcagaccaaatctgaatacagaaaaaaagaacttgaaaagttcatgcgaatctct gtttgcccgaaatgcgggggtaagcgtttaaaggataaagtcctctctgtaaaagtagct gataaatccataattgacgttacagatctttccatctctaaatcccttgagttctttgaa gatctttctctttcaaggaaggagactgatattgcaaaacaggttttaaaagaaataaaa tcgcggcttttgtttcttaacgaggttggactcgggtacctgacattgtcaagaacggca gggactctttccggaggagaggcgcaaagaatcagacttgcaacacagattggatcaaat cttatgggtgtattgtacgttttggatgaaccctcaataggtctccatcagcgtgataat cataaacttattgaaaccctgcaaaaacttcgtgatcttggcaatacgcttgtggtcgtt gaacatgatgaagatacgatcagggaggcggattatgttgtggatattggccccggcgca ggtgttcatggcggaaatattgttgcgttgggaacgccggaagagattgaggcaaatcct gattcactcaccggcaaatatctttccgggactgaaattattgaaattccaaagaaaagg cggaagagcgattctttcattcatataaccggatgcagtgaaaataatctcaaatctgtt gatgcacatattccgataggtcttttaaccctgattacaggagtttccggcagtggtaaa tcaacacttgtatacgatacattataccgtgcccttatgaaaacggtaaacgattcaaag acaagtcccgggaaatatgaaaagcttgaatttgattctgaaattgacaaagttattgta attgatcaaagccctataggaagaacgccccgttccaatcctgcaacatacaccaaagtg tttgatgagataaggaagatatttgccgaaacaaaagaggcaaagctaagaggctataaa cctggaagattttcattcaatgtcaaagggggacgctgtgaggcatgcaacggtgacggg cttataaaaattgagatgaactttttgcctgatgtgtatgttgagtgcgaggaatgtaaa ggaacaagatacaatgccgaaactcttgaagtcaaatataagggaaaatcaatttcagat gttttgaacatgacagttgaagaggcatactatctctttgaaaatattccttcaattaaa aacaaactcgaaactctttgcagggtaggtcttggttatgtaaaacttggccagagttca acaactctttccggaggagaggcacagagaattaaactcacaagggagctatccaaaaaa ggtaccggaaaaacaatttatcttctggatgaaccaactaccggtctgcatttccatgac gtgaaaaaactgattcaggttctaaacagtcttgttgacaagggaaatactgttgttgta attgaacacaatcttgatgtgattaaatcggcagatcatattattgatttgggacctgag ggaggcgatatgggaggagaaataattgccaccggcactccagaacaggttgcagagaat atgaaaagttataccggacattttcttgcctatatgatgaaaaaagaaactaaaaaataa

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