Methanochimaera problematica: F1737_04925
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Entry
F1737_04925 CDS
T09667
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mefw
Methanochimaera problematica
Pathway
mefw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1737_04925 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mefw03400
]
F1737_04925 (uvrB)
DNA repair and recombination proteins [BR:
mefw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1737_04925 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1737_04925 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
P-loop_SecA
Flavi_DEAD
AAA_22
Ribosomal_L12
DUF4996
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WOF17299
UniProt:
A0AA97FFL9
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All DBs
Position
969452..971398
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AA seq
648 aa
AA seq
DB search
MKANQKFELVSDFKPEGSQPEAIEELTKGLTVHKRFQTLLGVTGSGKTFTIANVISKVQK
PTLVLAHNKTLAAQLYNEFKEFFPKNRVEYFVSYYDFYQPESYLPAKDQYIEKDAHINPK
IEQMRLSATASLLSGKDVIVVASVSAIYGLGNPENFEKMGFELNVGDIVKRNDILEKLID
ILFERNDIELMPGRFRVKGDTIDLIPGYFNNIIRIEMFGDEIERISEIDKITGNRLDQMN
YFFVYPAKHFVIPESEKEEALLEINNELDEWLPNLGLLESHRLKQRTLFDIEMIRETGSC
KGIENYSRFFDHREKGVKPFCLLDYFPEDFLMVIDESHQTLPQVRGMYNGDRSRKEPLVK
YGFRLPSAFDNRPLVFSEFEEYMKNVIFVSATPGSYENENSPEIVEQIIRPTGLIDPEVE
VRPVKGQTDDVLKEIKKTIEKGDRVLITTLTKKLAEELSDYLAEQNIKTRYLHSDIKTIE
RTEIIRELRLGKFDVLVGINLLREGLDIPEVGFIGILDADKEGFLRDAKSLIQIIGRAAR
NVNSHVVLYGDRMTDSMKTAIEETNRRRKIQVEYNQSHGITPTTVVKPIREKEVEIKDTK
HIPKRDIPNVLIELESEMYSAADSLDFERAIELRERIKRLKEDLNKAD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
attaaagcaaatcagaagtttgaactggtctctgattttaaaccggagggatcacagcct
gaagcaattgaagagctaaccaaagggttaaccgtccataaaaggtttcagacactgctg
ggtgttactggttcgggaaaaacctttacaattgcaaatgtaatttcgaaagtacaaaag
ccaacccttgtccttgcacacaataaaacacttgctgcacagttatacaatgaatttaag
gagtttttcccaaaaaacagggttgaatattttgtatcctattatgatttttatcagcct
gaatcctatctccccgcaaaagatcagtatatagaaaaagacgcccacataaatcctaaa
attgagcagatgcgtctttccgccacggcttctcttctctcaggaaaagatgtgattgtt
gttgcatcggtttcggcaatatacggtcttggaaaccctgaaaattttgaaaaaatggga
tttgaactaaatgttggggatatcgtaaaaagaaacgatattcttgaaaaacttattgac
attttgtttgagagaaatgatattgaactcatgcccggacgcttccgggtaaaaggtgat
acaattgatttaatcccggggtatttcaacaatattatcagaattgagatgtttggtgat
gagattgaaagaatctccgagattgataaaataacgggaaaccgtcttgaccagatgaat
tacttttttgtttatcctgcaaagcattttgttataccggagtctgaaaaagaggaggca
cttttggagataaataatgagcttgacgaatggctgccaaatcttggtcttctggaatct
cacaggcttaaacaaagaaccctttttgatattgaaatgattcgggagacaggttcatgc
aaaggaattgaaaattattcccgcttttttgatcacagagagaagggagtaaaaccgttt
tgccttctggattatttccctgaagattttttgatggtaattgatgaaagccatcagact
cttccacaggtaaggggtatgtacaacggagacagatccagaaaagaaccgcttgtaaaa
tatggtttcagacttccatccgcatttgataatcgtcctctggttttcagcgaattcgaa
gagtatatgaaaaatgtgatttttgtatccgccacacccggaagctatgaaaatgaaaat
tcacctgagattgttgaacagattataagaccgacagggcttattgacccggaggttgaa
gtcaggcctgttaagggacagacagatgatgtcttaaaagagattaaaaagacgattgaa
aaaggggacagggtgcttatcacaaccctcaccaaaaaacttgcggaagaactatcggat
tatcttgccgaacagaatatcaaaacaaggtatcttcattcagatattaaaacaattgaa
agaacggagattatccgtgaacttcgtcttggtaaatttgatgttcttgtcggaatcaac
cttttaagagaaggtcttgatattcccgaagtaggttttatcggtattctggatgctgac
aaagaaggatttttgcgtgatgcaaaaagccttatacagataattggtcgtgctgcaaga
aacgtaaattctcatgttgttctttacggtgacaggatgacggattccatgaaaaccgca
attgaagagacaaaccgccgcaggaagattcaggttgaatataatcagtcacatggtatc
actccgacaactgttgtaaaaccaatacgggaaaaagaggtggaaattaaggatacgaaa
cacatcccgaagagagatataccaaatgttttaatcgaacttgaatctgaaatgtattcg
gcagcagattcacttgattttgaaagggccattgaattaagagagagaataaaaagatta
aaagaagatctcaataaagctgattaa
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