KEGG   Methanochimaera problematica: F1737_06170
Entry
F1737_06170       CDS       T09667                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
mefw  Methanochimaera problematica
Pathway
mefw03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mefw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    F1737_06170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mefw03032]
    F1737_06170
DNA replication proteins [BR:mefw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     F1737_06170
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RuvB_N Rad17 AAA_14 AAA_16 nSTAND3 AAA_assoc_2 AAA_3 Sigma54_activ_2 AAA_24 ResIII RCF1-5-like_lid TIP49 AAA_28 DUF815 AAA_5 Viral_helicase1 AAA_25 IstB_IS21 AAA_18
Other DBs
NCBI-ProteinID: WOF16330
UniProt: A0AA97FBE8
LinkDB
Position
complement(1222261..1223238)
AA seq 325 aa
MDEKNTIWIEKYRPRTLDDIVGQKEIVERLKNYVRSKSLPHLLFTGSAGIGKTTSAVALA
REFFGDDWQINFRELNASDERGIDVVRNQIKSFARTSPMGGAEFKILFLDEADALTTDAQ
AALRRTMENYAQTCRFILSCNYSSKIIDPIQSRCAIYRFKPLADEAIIEEINRISANEGL
NVSESAKSAMVYVAQGDMRKAINALQGAAIISSDISPEMIYEITSTAKPDEILELLQIIL
EGDFDAAEHCLHELTIRRGIAPNELLNQCYRTLISETGMKRSLKVELISHLGDADFRISE
GANPDIQMEALLARCIISAEKYSAE
NT seq 978 nt   +upstreamnt  +downstreamnt
atggatgaaaaaaatacaatatggattgaaaaataccgaccccggacactggatgacatt
gtcgggcaaaaagagattgtggagcgtctcaaaaactatgtgaggtcaaaaagccttcct
catctgttattcaccggcagtgcgggaataggcaaaacaacctctgctgttgcacttgca
agagagttctttggcgatgactggcagattaatttcagggaactgaatgcatctgatgag
aggggaattgatgtagtcaggaatcaaatcaaaagttttgcacgcacatctccaatgggg
ggtgctgaatttaagatattgtttttggatgaggccgatgcccttaccacagatgcacag
gcggctcttagaagaaccatggaaaattatgcccagacctgccgtttcattctttcatgt
aattattcgtcaaaaataattgatccgattcagagcagatgtgccatttatcgtttcaag
cctcttgctgatgaggcaataattgaggagataaacaggatatcggcaaatgaaggcctt
aatgtgagtgagagtgcaaaaagcgccatggtctatgttgcacagggcgatatgagaaag
gcgattaacgctcttcagggtgctgccataataagcagtgatatttcacctgagatgata
tatgagattacatccacagcaaaaccggatgaaatactcgaacttttgcagattatcctt
gaaggtgattttgatgcggcagagcactgtcttcatgaactgactataagacgtggaata
gctccaaatgaactcttaaatcagtgttacagaacacttatttccgaaaccggtatgaag
cgttccttaaaagtggagcttataagccatcttggtgacgctgactttagaataagtgaa
ggtgcgaatcccgacattcagatggaagcactgcttgcacgctgcattatcagcgcagag
aagtattcagccgaatag

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