Methanochimaera problematica: F1737_07145
Help
Entry
F1737_07145 CDS
T09667
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mefw
Methanochimaera problematica
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mefw03016
]
F1737_07145 (truD)
Enzymes [BR:
mefw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
F1737_07145 (truD)
Transfer RNA biogenesis [BR:
mefw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F1737_07145 (truD)
Prokaryotic type
F1737_07145 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WOF16493
UniProt:
A0AA97FEC2
LinkDB
All DBs
Position
1412115..1413386
Genome browser
AA seq
423 aa
AA seq
DB search
MMKSPYKNEQILGMEYYITDTPGTGGHLRETPEDFRVGELFRDVKLTGGPHLICELEKTN
WELQRAVKEITKRLGISHKRIGWGGTKDKRAVTTQLISIYGIKAEDLEDFHLKDINLKPL
GYANSQLSLGDLEGNNFDIWIRDCDGPDIAGNLESCVKTAQTGLPNYYGIQRFGVTRPVS
HLVGIEMLKGNYKEAVFRYVGFPCDDEHEETKTARQAFEDNQDPKETLSLMPVYLRYERA
MLHHLVEQPEDYKGALMVIPPKLLSMFVSAYQSYLFNRVLSKRIENSDNISEPETGDRLI
FPDGKEDIVTEKNIRTAKVHMKRGRCSLSIYMPGSEDYEIIGEMDRYAKEIMEETGITKK
GFSEVTELVGARFKGASRAISMRTEIDYKISENNINLKFTLPPGHYATTVCREIMKADPK
NMI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagcccgtataaaaatgagcagatactcgggatggagtattacataacagac
acacccggcacaggcgggcatttaagagagacaccggaagatttcagggtaggcgaactg
ttcagggacgtaaaattaacaggcggccctcatcttatatgcgaacttgaaaaaacaaac
tgggaacttcagcgtgctgtcaaggagatcacaaaaagacttggcattagtcataaaaga
atcggatggggcggaacaaaagacaaacgtgccgtaacaacacagttaatctcaatatac
gggattaaagcagaagatcttgaagatttccatttaaaagacataaacctaaaaccactc
gggtatgcaaacagccagctttcactcggagatctggaaggaaacaattttgacatctgg
attcgtgactgtgacggcccggatattgcaggaaaccttgaaagttgtgttaaaacagca
cagacaggcctcccgaattactacggaatacagcgcttcggagtcacaagacctgtttca
caccttgtcgggatagagatgctaaagggaaattacaaagaggctgtattcagatatgtc
ggcttcccgtgtgatgacgaacacgaggagacaaaaacagccagacaggcatttgaagac
aaccaggatccaaaagagacactcagcctgatgccggtatatctcaggtatgaaagggca
atgcttcaccacctcgttgaacagcccgaagactacaaaggcgccctgatggtaattcct
cctaaactcctctcaatgtttgtaagcgcctatcagtcataccttttcaaccgcgttctt
agcaaaagaattgaaaattcggacaacatatcagagcctgaaacaggagacagactcata
ttccccgatggaaaagaggacatagtcactgagaaaaacatcaggacggcaaaagtccac
atgaaaaggggacgctgctctctttcaatctacatgccgggatctgaagattatgaaatt
attggtgagatggacaggtacgcaaaagagataatggaagagacaggaatcactaaaaag
ggtttttcagaagtcacagagcttgttggtgcaagatttaagggtgcatcacgcgccata
tcaatgagaacggaaatcgattacaaaatatccgaaaacaacataaacttaaaattcaca
cttccccccgggcattacgcaacaacagtctgcagagagataatgaaagcagatcctaaa
aatatgatttaa
DBGET
integrated database retrieval system
