Methanochimaera problematica: F1737_07180
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Entry
F1737_07180 CDS
T09667
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mefw
Methanochimaera problematica
Pathway
mefw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
F1737_07180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mefw03000
]
F1737_07180
03021 Transcription machinery [BR:
mefw03021
]
F1737_07180
Transcription factors [BR:
mefw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
F1737_07180
Transcription machinery [BR:
mefw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
F1737_07180
RNA polymerase III system
TFIIIB
F1737_07180
RNA polymerase I system
SL1/TIF-1B
F1737_07180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
PDT
Motif
Other DBs
NCBI-ProteinID:
WOF16499
UniProt:
A0AA97I4H0
LinkDB
All DBs
Position
1419482..1420042
Genome browser
AA seq
186 aa
AA seq
DB search
MKVNPEESLKIENIVASAKVAESLDLQMINEKIKDAEYNKKRFPGVVLRMQDPKIAALVF
GSGKVVLTGAKSVDSLSKGLEILGKRLRDLDIDIPMELEYKIQNIVTSADLGSPINLNKI
AVGFNLERIEYEPEQFPGLVYRLEEPKVVVLLFGSGKLIITGGKQPEDAKGAVQKILSDL
SNLGLI
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaatccggaagagtcactgaaaatcgaaaatattgtggcatcggcaaaagtt
gcagaatcacttgatctgcaaatgataaatgaaaaaataaaggatgcggaatacaacaaa
aaaaggttcccgggcgtagttctgagaatgcaggacccaaagatcgcagcgcttgtattt
ggatcaggcaaagttgttctcactggtgcaaagagtgttgacagcctttcaaaaggtctt
gaaatcctcggaaaaagattaagggatcttgacatagacatcccaatggagcttgaatac
aagattcagaacattgttacgtctgcggatcttggatctccaataaacctgaacaaaatt
gctgtaggatttaatcttgaaagaatcgagtatgaacccgaacagttcccgggtcttgtc
taccgccttgaagagccaaaagtagtcgtattattgtttggctcaggaaaactcattatt
acaggtggaaaacagcctgaagacgcaaaaggtgctgttcaaaaaattctctcagacctt
tcaaaccttggattgatttaa
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