KEGG   Methanochimaera problematica: F1737_07180
Entry
F1737_07180       CDS       T09667                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
mefw  Methanochimaera problematica
Pathway
mefw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mefw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    F1737_07180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mefw03000]
    F1737_07180
   03021 Transcription machinery [BR:mefw03021]
    F1737_07180
Transcription factors [BR:mefw03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    F1737_07180
Transcription machinery [BR:mefw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     F1737_07180
  RNA polymerase III system
    TFIIIB
     F1737_07180
  RNA polymerase I system
    SL1/TIF-1B
     F1737_07180
SSDB
Motif
Pfam: TBP PDT
Other DBs
NCBI-ProteinID: WOF16499
UniProt: A0AA97I4H0
LinkDB
Position
1419482..1420042
AA seq 186 aa
MKVNPEESLKIENIVASAKVAESLDLQMINEKIKDAEYNKKRFPGVVLRMQDPKIAALVF
GSGKVVLTGAKSVDSLSKGLEILGKRLRDLDIDIPMELEYKIQNIVTSADLGSPINLNKI
AVGFNLERIEYEPEQFPGLVYRLEEPKVVVLLFGSGKLIITGGKQPEDAKGAVQKILSDL
SNLGLI
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaaggtcaatccggaagagtcactgaaaatcgaaaatattgtggcatcggcaaaagtt
gcagaatcacttgatctgcaaatgataaatgaaaaaataaaggatgcggaatacaacaaa
aaaaggttcccgggcgtagttctgagaatgcaggacccaaagatcgcagcgcttgtattt
ggatcaggcaaagttgttctcactggtgcaaagagtgttgacagcctttcaaaaggtctt
gaaatcctcggaaaaagattaagggatcttgacatagacatcccaatggagcttgaatac
aagattcagaacattgttacgtctgcggatcttggatctccaataaacctgaacaaaatt
gctgtaggatttaatcttgaaagaatcgagtatgaacccgaacagttcccgggtcttgtc
taccgccttgaagagccaaaagtagtcgtattattgtttggctcaggaaaactcattatt
acaggtggaaaacagcctgaagacgcaaaaggtgctgttcaaaaaattctctcagacctt
tcaaaccttggattgatttaa

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