Methanochimaera problematica: F1737_07280
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Entry
F1737_07280 CDS
T09667
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mefw
Methanochimaera problematica
Pathway
mefw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F1737_07280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mefw03021
]
F1737_07280
Enzymes [BR:
mefw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F1737_07280
Transcription machinery [BR:
mefw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
F1737_07280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_7
Fer4
Fer4_9
Fer4_10
Fer4_8
Fer4_2
Fer4_6
Fer4_4
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
WOF16517
UniProt:
A0AA97FDG5
LinkDB
All DBs
Position
complement(1435464..1436288)
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AA seq
274 aa
AA seq
DB search
MEIAFSRLDDGVAKFVLSGVSPAFANSLRRTMIGEVPTLAIEDVIIYDNSSALFDEILTH
RLGLIPLKTNLSEYKMKSECSCNGEGCPVCESVYTLSVEGPGLVTTSDLIPQNPETAPVN
PDIPVVKLEVGQKVVLEAHAELNIGLEHAKWQPTLACGYKTYPVITVSDKCDSCGACVDE
CPRSVLKLGKKSVEIIESNLENCSMCKLCEKACMASGIGDEPAIRISSDDSKFIFVVESD
GSMPVKDIMICALNKLKNKSESLVNVLTDISGAI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgcattcagcagacttgatgatggtgtggcaaagtttgtcttatccggagta
tctccggcttttgcaaacagtttacgcagaacaatgattggcgaagtgccgacacttgcg
attgaggatgtaataatctacgataacagtagtgcactcttcgatgaaattcttacacac
cgtctcggcctgattccgcttaagacaaacctttcagaatacaaaatgaaatccgagtgc
tcctgtaatggagaggggtgcccggtatgcgagtcagtgtatacattgagtgttgaggga
cccggtcttgtaacaacaagtgatcttattccgcagaaccctgaaacagcgcctgttaat
ccggacattcctgttgtaaaactggaagtcggtcagaaagttgttttggaggcccatgca
gaactgaatattggtcttgaacatgcaaaatggcagccgactctggcatgtggatataaa
acatatcctgtgatcacagtttcggataaatgtgactcgtgcggtgcatgtgtggatgaa
tgtccccgcagcgttttgaaacttggaaaaaaatcagttgagattattgaatctaatctt
gaaaactgttcaatgtgtaaactctgtgaaaaagcatgtatggcaagcggaatcggagac
gaacctgcaatccgtatcagctcggatgattcaaaattcatctttgttgtggagagcgac
ggttcaatgccggttaaagatattatgatatgtgctttaaataagctcaaaaacaagtct
gaaagtctggtgaatgtacttaccgatatttctggagcgatctaa
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