Methanochimaera problematica: F1737_09210
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Entry
F1737_09210 CDS
T09667
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mefw
Methanochimaera problematica
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mefw03016
]
F1737_09210
Enzymes [BR:
mefw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F1737_09210
Transfer RNA biogenesis [BR:
mefw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F1737_09210
Prokaryotic type
F1737_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
WOF16853
UniProt:
A0AA97FF24
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All DBs
Position
1810283..1811212
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AA seq
309 aa
AA seq
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MNSFENDDELKKLLECGIIAVDKPQGPTSHQVTAWVGEMLGGDIRIGHGGTLDPMVSGVL
IIMLGRAVRLAPVILKHRKEYIAIMRLHGDVPRKEIERVAEEFKGRTYQRPPRKSAVRRQ
LRIRSIYDIEVLDVDKRLVLLRVDCEAGTYIRSLCIHMALALGVGGQMEELRRSKSGGLG
LPDICTLHDLKDACEFAKEGDADLLKSFIYPAERLISEIPVVTIRNSAVDAICHGAQLAG
VGIIARDNYKKGSRVAVMTEKSELVCLGEALISSEEYKPGDTGIVIDPKIVVMKPKTYKK
GWTKHEKSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttttgagaatgatgatgaactaaaaaaacttcttgagtgcggcattatcgca
gttgacaaaccacagggaccgacaagccatcaggttaccgcgtgggtcggcgagatgctc
ggcggcgatataaggataggtcacggaggaactcttgatccgatggtttcaggtgttctg
attattatgcttggccgtgcagtccgtcttgctcctgttatcctgaagcacagaaaagag
tatatcgcgattatgcgtcttcacggcgatgttccaaggaaggagatcgagagggttgct
gaggagtttaagggcagaacataccaaagacccccgaggaagagtgctgtcagaagacag
cttaggataaggtcaatttacgatattgaagttctggatgtcgataaaagacttgttctt
ctccgtgttgactgtgaggcggggacatacataagatcgctttgcatacacatggcgctt
gcactcggtgtcggaggacagatggaggagcttaggaggtctaagtcaggcggactcgga
ctcccggacatctgcactcttcatgacctcaaagatgcctgcgagtttgcaaaggaggga
gacgctgatcttttgaagtcctttatctatccggcagagaggcttattagcgagattccg
gttgtgactattagaaacagcgctgttgatgcaatatgccacggtgcacagcttgccggt
gtcggcattattgcaagggataattacaagaagggcagccgcgttgcggtcatgacggaa
aaatccgagcttgtatgtctcggcgaggccctgatatcatccgaagagtacaaacccggc
gataccggaattgtaattgatccaaaaatagtcgtgatgaagcccaaaacatacaaaaaa
ggctggacgaagcacgaaaaatcggaataa
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