Methanochimaera problematica: F1737_10115
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Entry
F1737_10115 CDS
T09667
Name
(GenBank) PAS domain S-box protein
Organism
mefw
Methanochimaera problematica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_8
PAS_4
Response_reg
HisKA_2
PAS_3
HATPase_c
HWE_HK
HATPase_c_2
GAF
DUF1093
HATPase_c_3
NBD_SMAX1
LepB_GAP_C
Motif
Other DBs
NCBI-ProteinID:
WOF17007
UniProt:
A0AA97FDS9
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All DBs
Position
complement(1998461..2001943)
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AA seq
1160 aa
AA seq
DB search
MVSVLIVEDEAVIGLNLKRIVEKMGYQPLEVAVDAHEAVDVALEKKPDIILMDINLGGDM
DGIDASEEINRQMSVPVVFLSAYNDENLIRRCVNSGSYGFLAKPASPPEIKAAIEIALSK
HEAIRARNDIEKKESILQAVGFAANQFLSNPFFEDSLEKTLEFIGNATKFDKISIFQNNE
GGDGNKRSAFISHVWRKDGNKEGTVDACSFEIDYECISEKFYQNLSSGLTFLGGSGDYLR
EKSGLFENPEFCSFVAIPVFAGEYWWGFISFEDCHNNREWSSGEIEGLGAAAKMIGSALL
HKRMCNNIIKNEEKYRSLFNLLTDMCDNVPDMIWSKDLNNCFTFANRALSEVILNAEYGK
EPIGKNTRFFAERERKRHPEDPMWYTLDNSINKTDDLILKSGNSCNFIQKGYLKGKYTVL
DVFKAPFYDNSGNLMGTVGCARDVTKEKAIEANLRELNIRFTTFMDQLPAFAYIADTSGT
IIYSNRFMDENITAFEGTGDEMSHLIRERVRKVTEGGAFEEEESYKLSDGTLHTFNLLMF
PISAQGHVTAIGVIGVDVTAGRLAEKKRLESESKYRLLFENASDSIYVSEGDRCIDCNPR
LCELLGLEKSAILGKNVLDFSPEYQPDGRLSSEKKAELLSYAKEGKRVENFEWQIINSKG
GSLDVEISMNSAYIDNKLNYFVIARDITEEKRSKEALLESEKRYRSVVDNAPIGIEVFQD
GMICYASPNVSKMFGLSGDEILTMSLDELLHPDDARVVSEINKKRLLLERVPDSYNVRVN
PLLSKGRIIEVHVALIDWNNRPATLNFLTDITEKEKAAMALKESEERYRSVVENSKGIIL
ITQDEKILYANPVSEQFTGLSENEIKGRNFIDFIYEEDREKVLSYHKQRLLDGNTVLPYD
YKVRAYDHSGAVRTLDFSTTVIHWKGKPATLNFLLDITDQIEAKKQLERSLKEKTVLLQE
VHHRVKNNLAMINSLLSMQERSAENKDVINSLREAESRIFSIAVVHEGLYKSDSISTISA
QNHFAMLAGEIVSNYNPKGEISLDVNAGECGLGLSIAIPVSLVVNELLTNSIKYAFEGRY
KGKISIYMDCRGERTRMVISDDGVGIPKDFDIHKSSSLGMSLVRNIVEMQLEGDISLIRG
EGTKWVITYPHHRNSKKLIN
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggtatccgttttaattgttgaagatgaggcagtaataggtcttaatcttaagagaatt
gttgaaaaaatgggttatcagcctcttgaggttgccgtggatgcacacgaagcggtggat
gttgcacttgagaagaagcctgacataatactaatggatataaacctcggtggcgatatg
gacggaatcgatgcatcagaggagattaaccgtcagatgagtgtacctgtcgtttttttg
tcagcctacaatgatgaaaaccttatccggagatgtgttaattccggttcatatggtttt
ctggcaaaacctgcttctcctcctgagattaaagccgcaattgaaattgccctgtcaaaa
cacgaggcaatccgtgcccgcaatgatatcgaaaagaaggaatccatccttcaggcagtt
ggttttgctgcaaaccagttcctttcaaatccgttttttgaggattcccttgaaaaaact
cttgaatttattggtaatgcaacaaaattcgataaaatttccatatttcagaataacgaa
gggggggatggaaataaaagatcggcatttatcagtcatgtatggagaaaggatggcaat
aaagagggaactgttgacgcctgtagttttgaaatagactatgagtgtatttcagaaaaa
ttttatcagaatctttcgtcaggcctgacatttttaggtgggtccggagactatctgaga
gaaaaatccggtctgtttgaaaatccggaattttgttcttttgttgcaatacctgtattt
gccggcgaatactggtgggggttcataagttttgaggactgtcataataatcgtgaatgg
tcttcaggtgagattgaaggtcttggtgctgccgcaaaaatgataggctcggcacttctg
cacaagagaatgtgtaataacattattaaaaatgaggaaaaatatcgttctctctttaat
cttttaacagatatgtgtgacaatgttccggatatgatctggtcaaaagatctgaacaat
tgttttacatttgcaaacagagctctttctgaagtaattctgaatgctgaatatggaaaa
gagcctataggtaaaaatacccgtttctttgcggaaagagagagaaaaaggcatcctgaa
gatcctatgtggtacactcttgataatagcataaacaaaacggatgatctgattttaaaa
tccggaaattcctgcaatttcattcagaaaggatatttaaaagggaaatatactgtcctt
gatgtattcaaggctcctttttatgacaactccggaaatcttatgggcactgtcggctgt
gccagggatgttacaaaggaaaaggcgattgaggccaaccttcgtgaactaaatatcagg
ttcaccacttttatggaccagctgcctgcgtttgcctatattgcagacacatccggcact
atcatatactccaaccggtttatggatgaaaatattacggcttttgagggtaccggtgat
gaaatgtcccacctgattagagagagagtcagaaaagtaactgagggtggtgcttttgaa
gaagaggagagttataaattaagtgacgggaccctccatacgttcaatcttttaatgttt
ccaatatctgcccaagggcatgtaaccgcgattggtgtgattggggttgatgttacagcc
ggcagacttgcagaaaaaaagcgtcttgaatctgaaagcaaatacaggcttttgtttgag
aatgcaagtgattccatatacgtaagcgagggggacagatgcattgactgtaatccgagg
ctttgtgagcttttggggctggaaaaatccgccattcttggaaagaatgttcttgatttt
tcaccagaatatcagcctgacggaagactctcttcagagaaaaaggctgaacttctctct
tatgcaaaagaaggaaagagagtggaaaattttgaatggcagattataaattccaaaggg
ggatcacttgatgttgaaatcagcatgaattcagcttatattgacaataaactgaattat
tttgtaattgcccgtgacattacagaagagaaaagatcaaaggaagcactcctggaaagt
gaaaagaggtacaggagtgttgttgacaacgcacctatcgggatagaagtttttcaggac
ggcatgatctgttatgcaagccccaatgtttcaaaaatgttcgggctgagcggtgatgaa
atcctgacaatgagccttgacgaacttctgcaccctgatgatgcacgggtggtgtctgaa
ataaataaaaaaagactccttttggagagagttcccgacagttataatgtcagggtcaac
ccccttttgtccaaaggcagaataattgaagtccatgttgcacttattgactggaataac
aggcccgcaaccctgaactttttaaccgacataaccgagaaagaaaaggctgcaatggct
cttaaagagagtgaggagcgttacaggagtgttgttgaaaactcaaagggtattattctg
ataacacaggatgaaaaaattctttatgccaaccctgtttcagaacaatttacgggtctc
tctgaaaatgaaattaaaggaagaaattttattgatttcatttatgaggaagacagggaa
aaagtgctctcttatcacaaacagaggcttttagacgggaatacagttctgccatacgat
tataaggtacgtgcttatgatcacagcggagctgtcagaacacttgactttagtacgacg
gttattcactggaaaggaaaacctgcaactctgaatttccttttggacataactgatcag
atcgaggctaaaaagcagcttgaaagatctttaaaggaaaagaccgttctgttgcaggaa
gtgcatcacagggtcaagaacaatcttgcaatgataaattcacttctctcaatgcaggag
agaagtgcagaaaataaggatgtcataaattcacttcgtgaggccgagtcaaggatattt
tcaattgcggttgtacatgagggattgtataaatcggattcgatatccacaatatccgca
cagaatcactttgcaatgcttgcaggtgagattgtaagcaactataaccccaaaggggag
atatcccttgatgtcaatgctggagaatgcggtcttggtttatccattgcgattcctgtc
agccttgttgtgaatgaacttctcacaaattccatcaaatatgcttttgaaggcagatat
aagggtaaaatttcaatttatatggactgccggggagaaagaacgaggatggttatctcg
gatgacggtgtgggtatccccaaagattttgatattcataaatcatcttctcttgggatg
agccttgttagaaacattgtcgagatgcagcttgagggggatattagtctgataaggggc
gaggggacaaaatgggtaattacgtatcctcatcaccgtaattcaaaaaaattaattaat
taa
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