Methanochimaera problematica: F1737_11415
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Entry
F1737_11415 CDS
T09667
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mefw
Methanochimaera problematica
Brite
KEGG Orthology (KO) [BR:
mefw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mefw03400
]
F1737_11415 (sbcD)
DNA repair and recombination proteins [BR:
mefw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1737_11415 (sbcD)
Archaeal homologous recombinant proteins
F1737_11415 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WOF17239
UniProt:
A0AA97FFI2
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All DBs
Position
2274853..2276103
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AA seq
416 aa
AA seq
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MRILHTSDWHLGNSLYGRRRYEEFERFLEWLLDTIKKEEIDVLLISGDVFDSPVPGNRAL
ELYYGFLCSVARSVCRHVVVTGGNHDSPSLLNAPKELLGFLDVHVFGSLPENPDECVILL
GKDEGDGVYPPEDQGVIVCAVPYLRDRDIRRAEANESMEDKNRRFSEGIYQKYDLVCKRA
LEIREKSGINYPVIATGHLFATGGKTTEGDGVRELYVGTLCRVDASHFPECIDYLALGHL
HIPQTVGGNEKHRYSGSPLPMGFGEAKQQKKVIVAELSPGVCDTWDISVPVLQRLETVRG
DLDDISGRINGIIKSETPVWAEVIYEGQDIVTDLSGIVEGLVKNSCVEILRIKNNRFADS
VLRGMEEGETLDDLSEMDVFRRCLSYNQVPSNQHESLIATYSEVLNSLFEEDTLAE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaggatacttcacacatcagactggcaccttggaaattctctttacggcaggagaaga
tatgaggaatttgaaagatttctcgaatggcttttggatacgattaaaaaagaggagatc
gatgtcctgttaatatcgggggatgtttttgacagccctgttcccggaaacagggctctt
gaactgtattacgggttcctgtgcagcgttgcccgttctgtatgcaggcatgtcgtggtg
accgggggaaaccatgattcgccttcgcttttaaacgctccaaaagaacttctcgggttt
ctggatgttcatgtttttgggtcattgccggaaaacccggacgaatgtgtaattctgctt
ggcaaagatgagggtgacggagtttatccgcccgaagatcagggtgtcattgtctgcgca
gtcccttacctccgtgaccgtgacatcaggagggctgaggcaaacgagagcatggaggac
aaaaaccggagattctctgaaggtatctatcagaaatatgatctcgtatgtaaaagggca
cttgagatcagggaaaaatccggaattaattatccggttattgcaaccggacatctgttt
gcgaccgggggaaagacaactgagggtgacggtgtccgcgagctgtacgtgggaacactc
tgccgtgttgatgcctcacattttcctgaatgcatagactatcttgcccttggtcatctg
catattccgcagactgtcgggggaaatgagaagcaccgttactcgggttcccctctccct
atgggttttggggaggcaaaacagcagaaaaaagtaattgtggcagaattaagccccggt
gtgtgtgacacctgggatatttcggtccctgtccttcagaggcttgaaacagtcagggga
gatttggatgacatcagtggccggataaacgggataataaaatcagaaactcctgtctgg
gcagaggtcatttatgaggggcaggatatagtaacagatctttccgggattgtggaaggt
ctggttaaaaattcctgtgtagagattttaaggattaaaaacaaccgttttgccgatagt
gtcctcagaggaatggaagagggggaaacgcttgatgatttgtcggagatggatgtattc
aggcggtgtctttcgtataaccaggtgccttcaaatcagcatgagtcgcttatagcaacc
tactcggaggttttaaacagcctctttgaggaagatacgcttgcggagtag
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