Megasphaera stantonii: DKB62_00910
Help
Entry
DKB62_00910 CDS
T05599
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meg
Megasphaera stantonii
Pathway
meg03420
Nucleotide excision repair
meg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DKB62_00910 (pcrA)
03430 Mismatch repair
DKB62_00910 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_00910 (pcrA)
Enzymes [BR:
meg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKB62_00910 (pcrA)
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DKB62_00910 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DKB62_00910 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
ResIII
AAA_11
ADDB_N
DnaB
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
AXL20244
UniProt:
A0A346AWK1
LinkDB
All DBs
Position
complement(199021..201222)
Genome browser
AA seq
733 aa
AA seq
DB search
MNPILDTLNDRQLEAVQLTEGPLLITAGAGSGKTKVLTCRIAYLLEKGVSPYAILAITFT
NKAAKEMRERVEKLVGPRAESMWISTFHSFCAKLLRFEIDGRFGYTRNFTIYDTTDQMTL
IKDCLKQVNLDDKQFPPRSVLGTISSAKNALMDAYEFTGRADDFYAQKVAEVYTLYEKKL
KENNAMDFDDLLRLAVRLLQECEDVREKYQNRFQYILVDEYQDTNHAQYTLTKLLAQKWR
NICVVGDADQSIYAWRGADIRNIIDFTRDYPDAASIKLEQNYRSTKTILNAANAVIDNNE
SRPKKVLWTENPAGNKIIHYHAQTEHDEADYVAGVIYNRHEIGNEPYGDMAILFRTNSQS
RVLEEKLMRYAIPYTMVGGTKFYDRKEIKDVIAYLRLLYNPEDSLSLMRVINVPKRNIGA
TTIEHLADYAEQNGISLFEALSSTDDIPAITKRARASLEEFSIMIFELLNHVDEWDVQTL
IEETIKQSGYGAMLDKDAEHDVQGESRKENVGEFLSVAKDYMDSNPQGNLQDFLENIALV
SDVDEFEGSESKVTLMTLHAAKGLEFPVVFLVGLDEGLFPHSRTLMDSSQVEEERRLAYV
GITRAERQLYVTNASTRTMYGRISAYLPSRFLTEIPAELIEEFRRKTAMPQQSPSVPGRQ
RVSILSKPVATTLPKKHAVDTSFAAGDKVRHKIWGIGTVLEVIGEGQNMQMKIQFPTKGV
RQVVVKYAPLEKA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctattttagatacattgaacgaccggcagctcgaagcggtgcagctgaccgaa
gggccgctgctcatcacggccggcgccgggtcggggaagacgaaggtactgacctgccgc
attgcctacctgctggagaagggcgtgtcgccttatgccatcctggcgattaccttcacc
aataaggcggccaaggaaatgcgggaacgagtggaaaagctggtcggcccgcgggctgaa
agcatgtggatcagcaccttccattcgttctgcgctaaattgctgcgctttgaaatcgac
ggccgcttcggctatacccgcaattttacgatttacgatacgacggaccagatgacgctc
attaaggactgcctgaagcaggtcaatctggacgacaagcagtttccgccccggtccgtc
ctggggacgatttcgtcggcgaagaacgccctgatggacgcctatgaatttaccggccgg
gccgatgatttctacgcccagaaagtcgccgaggtatatacgctgtatgaaaagaagctg
aaggaaaacaacgccatggatttcgacgacctgctgcgcctggccgtgcgcctgctgcag
gaatgcgaagacgtgcgggaaaaataccagaaccgctttcagtatatcctcgtcgacgaa
taccaggatacgaaccacgcccagtacacgctgacgaagttgctggcccagaaatggcgc
aacatctgcgtcgtcggcgacgcggaccaaagcatttacgcctggcgcggcgcggacatc
cgcaatatcatcgactttacgcgcgattatcccgacgcggcgtctatcaagctggagcag
aactatcgctcgacgaagactattttgaacgccgccaacgccgtcatcgacaacaacgaa
agccggccgaagaaggtcttgtggacggaaaatccggcaggcaataaaattattcactac
catgcccagacggagcacgacgaagccgattacgtcgccggcgtcatttataaccgccac
gaaatcggaaacgagccctacggcgacatggcgattttattccgtaccaactcccagtcc
cgcgtgctggaagaaaagctcatgcgctacgccattccttacacgatggtcggcgggacg
aagttctacgaccgcaaggaaatcaaggatgtcatcgcctacctgcgcctgctgtataat
cctgaagacagcctgagcctcatgcgggttatcaacgtgccgaagcgaaacatcggcgcg
acgacgatagagcatctggccgactacgccgagcagaacggcatttccctctttgaagcc
ttgtcttcgacagacgatattccggccattacgaagcgggccagggcgtcgctggaagag
ttttctatcatgatcttcgagctgctcaaccacgtcgacgaatgggacgtacagaccctt
atcgaagagaccatcaagcagtccggttacggggccatgctcgataaggacgccgagcac
gacgtgcagggcgaaagccgcaaagaaaatgtcggcgagttcctttccgtcgccaaggat
tacatggattccaatccccaggggaatttgcaggattttctggaaaatatcgccttggtc
agcgacgtcgacgaatttgagggcagcgagtccaaggtgacgctcatgacgctgcatgcc
gcaaaggggctggaattccccgtcgtctttctcgttggcctcgatgaaggactgttcccg
cacagccgcaccctcatggattcgtcgcaggtggaagaagagcgccgcctagcttacgtc
ggcattacgcgggccgaacggcagctgtacgtgaccaacgcttcgacgcggacgatgtac
ggccgcatatcggcgtatttgcccagccgtttcttaaccgaaatcccggcggagctcata
gaagaattccgccgcaagacggccatgccccagcagtcgccgtccgtgccgggacggcag
cgcgtatcgattctgtccaagcccgtggcgacgacgctgccgaaaaagcatgccgtcgac
acgtcctttgccgccggagataaggtgcgccataagatttggggcatcggcaccgtcctg
gaagtcatcggcgaagggcagaacatgcagatgaagatacaatttccgacgaaaggcgtc
cggcaggtcgtcgtcaagtacgcgccgctggaaaaggcctag
DBGET
integrated database retrieval system
