Megasphaera stantonii: DKB62_01525
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Entry
DKB62_01525 CDS
T05599
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
meg
Megasphaera stantonii
Pathway
meg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DKB62_01525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meg03021
]
DKB62_01525
Transcription machinery [BR:
meg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DKB62_01525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_1
Sigma70_r1_2
RFC1
Exonuc_VII_L
PIP49_N
Cnd1_N
Motif
Other DBs
NCBI-ProteinID:
AXL22327
UniProt:
A0A346B2I4
LinkDB
All DBs
Position
complement(311274..312542)
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AA seq
422 aa
AA seq
DB search
MVKTTDAVENTIEKKAGAKKSTAKKAPKRKTSKKKEPAKQMSEQERREIVLQHIKQLLQT
GQKKGCLTYTEIMNVMEEDDLSPEQIDKMYELFADKGIDIIGEDDSLNDNDDLNVDDDGE
PVPDLHNVDLSVPEGINIDDPVRMYLKEIGRVPLLSATEEIALAQAIERGNSPDATEEEL
KAGAMAKKKLTDANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLLKAVDKFDYSKGYKFST
YATWWIRQAITRAIADQARTIRIPVHMVETINKLIRISRQLLQDKGREPLPEEIAEKMDI
PVERVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDSEAIAPDDAASFILLKEQIEDVFS
CLTDRERKVLYLRFGLKDGRPRTLEEVGQHFNVTRERIRQIEGKALSKLRNWGKREKIKD
FL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaacgacagatgcagttgaaaatacaatagaaaagaaagccggcgcgaagaaa
agtacagcgaagaaagcgccgaaacgcaaaacaagtaagaaaaaagaaccggcaaagcag
atgagcgaacaagaacgccgtgaaatcgtcctgcagcacattaagcagcttctccaaacg
ggccagaaaaaaggctgtctcacgtatacggaaatcatgaacgtcatggaagaggacgac
ctgtcgccggaacaaatcgacaagatgtacgagctgtttgctgataagggcatcgacatc
atcggcgaagacgattccctgaacgacaacgacgaccttaacgtcgacgacgacggcgaa
cccgttcccgatctgcacaacgtcgatttaagcgttcccgagggcattaatatcgacgac
cctgtccgcatgtatctgaaggaaatcggccgggtacccctcctgtcggcgacggaagaa
atcgcgttggcccaggctatcgagcgaggcaattcgcccgatgcgacggaagaagaatta
aaggccggagctatggccaagaaaaaactgaccgatgcgaacctgcgcctcgtcgtcagc
attgccaagcggtacgtaggacgaggcatgctgttcctcgatctcattcaggaaggcaat
ctgggcctcttgaaagccgtcgacaaattcgattacagcaagggctataaattcagtacc
tatgcaacatggtggattcgccaggccattacccgggctattgccgatcaagcccggacg
atacgcattcccgtccacatggtcgaaacgattaataagctcatccgcatttcccgtcag
ctcctgcaggataaaggcagagagcccctgccggaagaaattgccgaaaagatggatatt
cccgtagaacgcgtccgggaaatcatgaagattgcccaggaaccggtatcgctggaaacg
cctattggcgaagaagaagactcccatttgggagactttatcgaagactccgaagcgatt
gctccggacgacgcagcgtcctttattttgctgaaagagcagatcgaagacgtgttctcc
tgcctgacggacagggaacgcaaggtcctgtacctgcgcttcggcttgaaggacggccgt
cccagaacgctggaagaagtaggccagcattttaacgtcacgcgcgaacgaatccgccag
attgaaggcaaggctctcagcaagctgcgcaattggggcaagcgggaaaagattaaagat
tttctttaa
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