Megasphaera stantonii: DKB62_01620
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Entry
DKB62_01620 CDS
T05599
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
meg
Megasphaera stantonii
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meg03032
]
DKB62_01620
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_01620
Enzymes [BR:
meg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DKB62_01620
DNA replication proteins [BR:
meg03032
]
Prokaryotic type
DNA Topoisomerases
DKB62_01620
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DKB62_01620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
Phage_zn_bind
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AXL20370
UniProt:
A0A346AWX7
LinkDB
All DBs
Position
complement(334488..336761)
Genome browser
AA seq
757 aa
AA seq
DB search
MLEFPIKRTIIIDDTKKKKRGRKKKDDGEKMVINGTVNLPEKKPLKKMDPLPKNAKNLVI
VESPAKAKTIERFLGSSYKVMASRGHLRDLPRNQFGVNIEDGFTPSYTNMWDKRKLIEEL
QDEFIRSKKVYLATDPDREGEAISWHLAHLLEIDPKDACRVMFHEITKKAVLAGMEDPKP
IDLKKVDAQQARRVLDRIVGYKLSPLLWKKVCKGLSAGRVQSVAVRLICEREEEIKAFVP
EEYWTVGGTYKTEQGLVLTTELVKIDGEKAKISDGDMAQKIAADLQWEQRGEEGREPDRI
VKVEKRKRKRQPQPPFTTSTMQQECVSKLNFGAKKTMMLAQQLYEGLDIGEQGHVGLITY
MRTDSTRINDDMVQAARDFIMSTYGKEYVPEKARVYKTKQSSQDAHEAIRPTSLELTPHV
VSPFLTRDQLRLYTLIWNRFLASQMEAVETEHMAISIASGIYELRAAGYKVLFKGFTELY
EDAKKDKTLSELPHIEEGSVVHNQTVEPAQHFTQPPARYTEASLIKTLEEKGIGRPSTYA
PIMDTIQNRNYVEKKDKQFIPTELGVIIVDLLKKYFERIINVGFTAHMEEELDDIEQGKD
TYTHVLQEFYDVFKPEMDVAEQQMEKVAVAGQDSGQVCELCGAPMVYKFGRFGKFLACSN
FPECRNTKAIVEDLGITCPKCGQGSLIKRKSKRGRVFYGCSEYPNCDFVLWNQPIDKKCP
VCGSIMVVKHYKKGPDKIFCSNAECENHKKGEAINEE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatttccgattaaacgaacgattattattgacgatacgaagaaaaagaagcgg
ggccgcaagaagaaagacgacggcgaaaagatggtcattaacggaaccgtgaatctgccg
gaaaagaagccgctgaaaaaaatggaccccttgccgaaaaacgccaaaaatctggttatc
gtggaatcgccggccaaggccaagacgattgaacgctttttaggcagctcgtataaggta
atggccagccgcggccatctccgcgatttaccgcgcaatcagttcggcgtcaatatcgaa
gacgggtttacgccgtcgtatacgaacatgtgggataagcgcaagctcattgaagagctg
caggacgagttcatccgttctaaaaaagtatatctggcgactgacccggaccgcgaaggc
gaagcgatttcctggcacttagctcatttgctggaaatcgacccgaaggacgcctgccgc
gtcatgttccacgaaattacgaaaaaggccgtactggccggcatggaagaccctaagccc
atcgatttgaagaaggtcgacgcccagcaggcccgccgcgtcctggaccgcatcgtaggg
tacaagttgagccccctgctgtggaaaaaggtctgtaaggggctgagcgccggccgcgtg
cagtccgtagccgtgcggcttatctgtgagcgcgaagaagaaatcaaggcctttgtgccg
gaagaatactggactgtcggcgggacgtacaagaccgaacagggcctggtccttacgacg
gagctggtgaaaatcgacggtgaaaaggccaagatcagcgatggagacatggctcagaag
attgccgccgatttgcagtgggaacagcgcggcgaagaaggccgcgaaccggaccgaatc
gtcaaggtcgaaaagagaaagcgcaagcgtcagccccagccgccctttacgacgtcgacg
atgcagcaggaatgcgtcagcaagctgaacttcggcgctaagaagacgatgatgctggcc
cagcagctgtatgaaggcctggatatcggcgaacagggccacgtgggcctgattacgtac
atgcgtacggactcgacgcgtatcaatgacgacatggtccaggcggcccgcgatttcatc
atgtcgacgtacgggaaggaatacgtgccggaaaaggcccgcgtatacaagacgaagcag
tccagtcaggatgcccacgaggcgatccgcccgacatcgctggaactgacgccgcacgtc
gtctcgccgttcctgacgcgggaccagctgcggttgtacacgctcatttggaaccgtttc
ctcgccagccagatggaagccgtagaaacagagcacatggccatcagcatcgccagcggc
atatacgagctgcgggcagccggatataaagtattgtttaaaggctttacggagctgtac
gaagatgcgaaaaaggataagaccctgtcggagctgcctcatatcgaagaaggctccgtc
gttcataatcagaccgtagaaccggcgcagcattttacgcagccgccggcccgctatacc
gaagccagccttatcaagacgctggaagaaaagggcatcggccggccgagcacgtacgcg
ccgattatggatacgattcaaaaccgcaactatgtggaaaagaaggataagcagttcatt
ccgacggagctgggcgtcatcatcgtcgacttgctgaaaaagtatttcgaacgcatcatc
aacgtcggctttacggctcatatggaggaagagctggacgatattgaacaggggaaggac
acgtatacgcacgtcctgcaggaattttacgacgtgtttaagccggaaatggacgtggcg
gagcagcaaatggaaaaggtagccgtagccggtcaggattccggtcaggtctgcgaactc
tgcggcgcgcctatggtatataaattcgggcgcttcggcaaattcctggcctgttccaat
ttccccgaatgccgcaacacgaaggctatcgtcgaggatttgggcattacctgccccaaa
tgcggccaagggagcctgatcaagcgcaaatcgaagcggggccgcgtgttctacggctgc
agcgaatatcctaactgcgatttcgtcctgtggaaccagcctatcgataaaaaatgtcct
gtctgcggcagcatcatggtcgtcaagcattataaaaaaggaccggataaaatcttctgc
agcaacgcagagtgtgaaaaccataagaagggtgaagccatcaatgaagaatag
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