Megasphaera stantonii: DKB62_02485
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Entry
DKB62_02485 CDS
T05599
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
meg
Megasphaera stantonii
Pathway
meg00470
D-Amino acid metabolism
meg00550
Peptidoglycan biosynthesis
meg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DKB62_02485 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DKB62_02485 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
meg01011
]
DKB62_02485 (murD)
Enzymes [BR:
meg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DKB62_02485 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
meg01011
]
Precursor biosynthesis
Amino acid ligase
DKB62_02485 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_2
DAO
GIDA
FAD_binding_2
Pyr_redox_3
NAD_binding_8
FAD_oxidored
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AXL20525
UniProt:
A0A346AXD2
LinkDB
All DBs
Position
complement(505920..507284)
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AA seq
454 aa
AA seq
DB search
MSIMDFSGKKILVIGAGISGRAASMALARHGGAVILNDKKDIDCTEEPWPALQRAGVKFV
FGSQENSLLDGVDIVVPSPVISPEIPIMKEALSRRLPVWSEVETACRVTDADILGVTGTN
GKTTTTTLLGEIMKASGRQTVVGGNIGIGLSEQAADLPKEAVVVAELSSFQLEFTQTMKA
KAAVVLNITPDHLDRHHTMEAYAEAKKRIFRNQDGDDTAVLNYDDPLVRAMAPDMTGRVV
WFSTQGEVPVGAFYQDGQLILRMDGQDTLICREDELHLFGKHNIQNCLAASLLAYAAGVP
LDVISGVLKSFRGVEHRLEKVRTIHGVTYYNDSKGTNTDASIKALEAFSGHLVLIAGGYD
KMTPLDEFMKLAAEKVDTLILIGAAADRFEQEAKKAGVKDIRRAGYSMERAIMMARKIAK
APQAVLLSPACSSFDMYDNFEQRGRVFKGIVNAI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcataatggatttttccgggaaaaaaatattggtcatcggcgcaggtatcagcggc
cgggccgcatcgatggccttggcccgtcacggcggcgcagttattctcaatgacaaaaag
gacatcgactgcacggaagagccgtggccggcgctgcagcgtgccggcgtcaagttcgta
ttcggcagccaggaaaattcgctgctggacggcgtggacatcgtcgtgccgtcgccggtt
atttctccggaaattcccattatgaaagaagcgctgtcgcgccgtttgcccgtttggagt
gaagtagaaacagcctgccgcgtaaccgatgccgacatattgggcgtgacgggtacgaac
gggaagacgacgacgacgaccctgctgggggaaatcatgaaggcctcaggccgtcagact
gtcgtcggcggcaatatcggcatcggcctttccgagcaggcggcagatttgccgaaggaa
gccgtcgtcgtagcggaattgtccagcttccagctggaatttacgcagacgatgaaggct
aaagcggccgtcgtcctgaatattacgccggaccacctagaccgccatcatacgatggaa
gcctacgccgaagcgaagaagcgcattttccgcaatcaggatggggacgatacggctgtg
ctgaattacgacgacccgctggtcagggccatggctccggacatgacgggccgcgtcgtc
tggttttccacgcagggcgaagtgcctgtcggtgcgttttatcaggacgggcagcttatc
ctccgcatggacggccaggatacgctcatttgccgggaagacgaacttcatttattcggc
aagcataatattcaaaattgtttggctgcgtcgctgctggcttacgccgccggcgtgcct
ctcgacgtgatctctggcgtattgaaatcgttccggggcgtagagcaccgtctggaaaaa
gtgcgcacaattcacggcgtcacctattacaatgattcaaaaggaacgaataccgacgcg
tctatcaaagcgctggaagcgttttcgggacacttggtcttgattgccggcggctacgat
aagatgacacctctcgacgagtttatgaagctggccgccgaaaaggtcgatacgcttata
ttgatcggcgcggcggcagatcggtttgaacaggaagcgaagaaggccggcgtcaaggat
attcgccgagccggatacagcatggaacgggcgattatgatggcccgcaagattgccaaa
gcgccgcaggccgtactgttgtctccggcatgctcgagctttgacatgtacgataatttt
gagcagcgcggacgggtcttcaagggaatcgtcaacgcgatatag
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