KEGG   Megasphaera stantonii: DKB62_02715
Entry
DKB62_02715       CDS       T05599                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
meg  Megasphaera stantonii
Pathway
meg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:meg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DKB62_02715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meg03400]
    DKB62_02715
DNA repair and recombination proteins [BR:meg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DKB62_02715
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DKB62_02715
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UvrD-helicase AAA_5 AAA_19 UB2H TBK1_CCD1 AAA_22 AAA_25 AAA_16 FliT RIP_P131-like HEM4 DUF4844 HH_RND_rel
Other DBs
NCBI-ProteinID: AXL20569
UniProt: A0A346AXH6
LinkDB
Position
complement(559935..562094)
AA seq 719 aa
MDIQSYLNKDYDTSRPFRVVAPYEPMGDQPEAIASLAEGIRSGQWAQVLLGATGTGKTFT
MAKVIEAVQKPTLVIAHNKTLAAQLCSEFKAFFPDNEVAYFVSYYDYYQPEAYIASTDTY
IEKDASINDEIDKLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSDLVVSLRLGQEKT
QEEILHKLVDIQYSRNDMNLERGTFRVHGDTIEVFPAAFDNSVIRIEMFGDEIDRLTEVN
VLTGEVVAERKHVAIYPASHYVTTKEKMDKALKTIEAELEERLAVLKEGGHLLEAQRLEQ
RTRYDMEMMMEMGYCSGIENYSRHLAGRKAGEAPYTLLDYFPDDFLIMIDESHVTLPQLR
AMYAGDRSRKENLIEYGFRLPSALDNRPLKFEEFVERINQIIYVSATPGPYEMEVQTNLA
QQIIRPTGLLDPKVEVRPIAGQMDDLLGEIRKRTEKNERVLVTTLTKKMAEDLTDYLKEM
GVLVRYLHSDIATIERAESIRDLRAGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFL
RSDTSLIQTMGRAARNVDGTVIMYADKITDSMARAMDETKRRREVQDAYNQKHHITPKSV
KKDVVNLIELTKVAEDQAEYRGKGEKLTKEALHKVINTMTQQMKTAAKNLEFEKAAELRD
RLGQLRQQLADMSHDDTLPKELQGEDMPSSRYVRKVRRPDARRKKPDSPGKPKAKRSKT
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggatatacagtcgtatttgaataaggattatgatacgtcgcggccgtttcgcgtcgtc
gcgccgtacgagcccatgggcgaccagcccgaggcgattgcgtcgctggccgaggggata
cggtcgggccaatgggcccaggtgctactgggcgcgacggggacaggcaagacctttacg
atggccaaggtcatcgaggccgtgcagaagccgacgctggtcatcgcgcataacaagacg
ctggcggcccagctgtgcagcgaattcaaggcctttttcccggacaatgaagtggcctat
ttcgtcagttattacgattattatcagccggaggcgtacatcgcgtctacggatacgtat
atcgaaaaggacgcgtcgattaatgatgaaatcgacaagttgcgccattcggctacgatg
agcctgtttgaacggcgcgacgtcatcatcgtggcgtccgtatcctgtatttacggctta
ggcgacccggaagattacagcgatctcgtcgtgtcgctgcgtctgggacaggaaaagacg
caggaagaaattcttcataagctcgtcgatatccagtattcccgcaacgacatgaacctc
gaacgaggtaccttccgcgttcacggcgatacgatagaagtatttccggcggccttcgac
aattccgtcatccgcattgaaatgttcggagacgaaatcgacaggctgacggaggtcaac
gtgctgaccggcgaggtcgtcgccgagcgcaagcatgtggcgatttatccggccagccat
tatgtcacgacaaaggaaaaaatggataaggccctgaagacgatcgaggctgagctggaa
gagcgcctggccgtcctgaaggaagggggccatttgctggaagcgcagcggctggagcag
cggacgcggtacgatatggaaatgatgatggaaatgggctactgctcgggcatcgaaaac
tattcccgccatctggcggggaggaaggccggcgaagcgccgtacacgctcctcgattat
ttccccgacgatttcctcatcatgatcgacgaatcgcacgttaccttgcctcagctgcgg
gctatgtacgccggcgaccggtcgcggaaggaaaacctcatcgaatacgggttccgcctg
ccgtcggcgctggacaacaggccgctgaaatttgaagagttcgttgaacggattaaccag
attatctacgtcagcgcgacgccggggccctatgagatggaagtccagaccaatctggcc
cagcagattatccgcccgacagggctcctggacccgaaggtcgaagtgcggcctattgcc
ggacagatggacgatttgttaggcgaaatacggaagcggacggaaaagaacgaacgcgtg
ctggtgacgacgctgaccaagaagatggccgaggatttgaccgattatttaaaggaaatg
ggcgtcctcgtccgctatctccattcggatattgcgacgattgagcgggccgaaagcatc
cgcgacctgcgggccggcgtattcgacgtcctcgttggcatcaacctgctgcgcgaaggg
ctggacatgccggaagtgtctctcgtagcgattctcgacgctgacaaggaaggcttcctt
cgttccgatacgtccctcatccagacgatggggcgggcggcgcgaaacgtcgacggcacg
gtcatcatgtacgccgacaagattaccgattccatggcccgggctatggacgaaacgaag
cggcgccgcgaagtgcaggacgcttacaatcaaaagcatcatattacgccgaaatccgtc
aagaaagacgtcgtcaacctcatcgagctgacgaaggtcgccgaagaccaggctgaatat
agaggtaagggcgaaaagctgacgaaggaggccttgcataaggtcatcaacaccatgaca
cagcagatgaagacggcggcgaaaaatctggaatttgaaaaggcggcggaactgcgcgac
cgcctggggcagctgcggcagcagctggctgatatgagccatgacgacacgctgcccaag
gagctgcagggcgaggatatgccctcgtcccggtatgtgcgcaaggtgcgccggcccgac
gcgcggcggaaaaagccggactcgccgggcaaacctaaggcaaaaaggagtaaaacgtaa

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