Megasphaera stantonii: DKB62_02905
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Entry
DKB62_02905 CDS
T05599
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
meg
Megasphaera stantonii
Pathway
meg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DKB62_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_02905
Enzymes [BR:
meg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKB62_02905
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKB62_02905
RecFOR pathway proteins
DKB62_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_14
DUF815
Rad17
AAA_3
nSTAND3
TsaE
Sigma54_activ_2
NB-ARC
NTPase_1
RNA_helicase
AAA_18
AAA_17
AAA_24
MotCF
IstB_IS21
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXL20604
UniProt:
A0A346AXL1
LinkDB
All DBs
Position
complement(606727..607749)
Genome browser
AA seq
340 aa
AA seq
DB search
MEEHRIVETGPIAGDSWQYSLRPHYLKEYIGQQKVKQNLEVFIQAAKLRQEALDHVLLYG
PPGLGKTTMAGIIANELGVNLRITSGPAIERPGDLAALLTNLQERDLLFIDEIHRLSHSV
EEVLYAAMEDYALDIVIGKGPSARSVRIDLPPFTLVGATTQVGRLAPPLRDRFGVICRLE
FYRPEELVLIIKRTADILNVEIDDAGALEVARRSRGTPRIANRLLKRVRDFAQVAGEQTI
SSALAGKALDRLEVDACGLDRTDRRVLQVIIEKFGGGPVGLDTIAAAISESVDAVEDVYE
PFLMQLGFLNRTPRGRVVTEAAYAHLGLPSPSEGKGSSLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtggaagaacatcgcattgtggagacaggcccgattgcgggagattcctggcagtacagc
ctgcgtccccactatttaaaagaatatataggacaacagaaggttaaacagaacttggaa
gtctttatccaggcggcaaagctgcggcaggaagcgctggatcacgtgctgctgtacggc
ccgcctgggctgggcaagacgacgatggccggcatcatcgccaatgagctgggcgtcaac
ctgcgcattacgtcggggccggctatcgagcggcccggcgatttggcggctctgctgacg
aacttgcaggagcgggacttgctgtttatcgacgaaatacaccgcttgtcccacagcgtg
gaagaagtgctgtacgcggcgatggaagactatgctctggacatcgtcatcggcaagggg
ccaagcgcccggtcggtgcgcatcgacctgccgccctttaccctcgtcggcgcgacgacc
caggtcggacgcctggcgccgccgctgcgcgaccgcttcggcgtcatctgccggctggaa
ttttaccggcccgaagagctggtgctgattatcaagcggactgccgatattttgaacgta
gaaatcgacgatgccggcgcgttggaagtggcgcgccgctcgcggggcacgccgcgaatt
gccaaccgcctgctgaagcgggtccgcgatttcgctcaggtagccggcgagcagacgatt
tcatcggctttggccggaaaagccttggaccggctggaggtcgacgcctgcggcctggac
cggacggatcggcgggtcttgcaggtcatcattgaaaaattcggcggcggccctgtcggc
ctcgatacgattgccgcggcgatcagcgagtccgtcgacgccgtcgaagacgtgtacgaa
cccttcctcatgcagctcggatttttgaaccgcacgccgcgggggcgggttgtaacggag
gcggcttacgcccatctgggattgccgtcgccgtcggaaggcaaaggctcttcgttattt
tag
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