Megasphaera stantonii: DKB62_06255
Help
Entry
DKB62_06255 CDS
T05599
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
meg
Megasphaera stantonii
Pathway
meg02020
Two-component system
meg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DKB62_06255 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DKB62_06255 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meg03021
]
DKB62_06255 (rpoN)
Transcription machinery [BR:
meg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DKB62_06255 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
MarR_2
HTH_31
LacI
HTH_3
HTH_IclR
HTH_24
DUF7343
Sigma70_r4
Crp
Xre-like-HTH
Trp_repressor
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AXL21189
UniProt:
A0A346AZ96
LinkDB
All DBs
Position
complement(1336173..1337456)
Genome browser
AA seq
427 aa
AA seq
DB search
MAKIALTLEQKIKLSQMQRLTIQMMTLRGQDLVEFLHEKVTENPLLDIRYPDVRPRSGGG
MEKPIDNIRSGGDSLEEKLMKELRVQAVSKKVMLAAGLVIQSLDEKGFFAAALEDIGVDY
GLSVADMEEGLRLVQTFDPPGVGARTIQEALLIQTRRRKDAPAGAEELLLNHYDDFIRGH
WKRLEEQMGLSPEGLGRIRRFLKKLALQPVAPADERTEFVRADIEILCDEEGHLTVRSLE
DLPDVFFRDDLYTAYGKDGDKATQDFIRKAKRQFLDLQTALAYRRQSIFTVVEHIVKEQG
EHFLHGGSLRPLTQKDIAAATGLSAATVSRVCRDRYALFRGRIYPIQSFLAHHYRCDRER
DGSISDKAIMEKMARLIAEEDCRRPWSDQDLADYFSQQSVHVARRTITKFRFKMNIPNSR
MRRRMKE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcgcgttaacgttagagcaaaagattaaattatcgcagatgcagcgcctg
accattcagatgatgaccctgcggggacaggatttggtggaatttcttcacgaaaaggta
acggaaaatcccctgctggatattcgctaccctgacgtgcggcctagatctggcggaggt
atggaaaagcctatcgacaatatccgcagcggcggcgactcgctggaggaaaagctcatg
aaagagctccgcgtccaggccgtttccaaaaaggtgatgctggccgccgggctggtcatc
cagtccctcgacgagaaaggatttttcgccgccgcgttagaggacatcggcgtcgactac
ggcttgtctgtcgccgatatggaagaggggctgcgcctggtccaaaccttcgacccgccg
ggcgtcggcgcgcggacgatacaggaagccttgctgattcagacgcgccgccggaaggac
gcgccggcaggggcggaagagctgctgctgaaccattacgacgatttcatccgcggccat
tggaagcggctggaagaacaaatgggcttgtcgccggaagggctgggacgaatccggcgc
tttttgaagaagctggccctgcagccggtcgcgccggccgacgagcggacggaattcgtg
cgggctgatatagaaatcctctgcgatgaagagggacatctgacggtgcggtctctggaa
gacctgccggatgtatttttccgcgacgatttgtatacggcttatggtaaggacggcgat
aaggcgacgcaggattttatccgcaaggccaagcggcagtttttggatttacagacagcc
ctggcgtaccgccgccagtcaatttttacagtcgtggagcatatagtaaaggaacagggc
gaacatttcctccatggcggcagcctgcgtcctttgactcaaaaagacatcgctgcggcg
acagggctcagcgcggcgacggtgagccgcgtctgccgcgaccgctacgccttgtttcgc
ggccgcatctatccaattcagtcttttttggcccaccattaccgctgcgatagggagcgg
gacggcagtatttccgacaaggctatcatggagaaaatggcgcggcttattgcggaagaa
gactgtcggcgtccctggtctgatcaggatttagccgattacttcagccagcagtccgtg
cacgtggcacggcggacgattacgaaatttcgatttaaaatgaatatccccaacagccgc
atgcgaaggagaatgaaggaataa
DBGET
integrated database retrieval system
