Megasphaera stantonii: DKB62_08820
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Entry
DKB62_08820 CDS
T05599
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
meg
Megasphaera stantonii
Pathway
meg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DKB62_08820 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meg03019
]
DKB62_08820 (rny)
Messenger RNA biogenesis [BR:
meg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DKB62_08820 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
KH-I_KHDC4-BBP
DUF2536
Motif
Other DBs
NCBI-ProteinID:
AXL21663
UniProt:
A0A346B0M0
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Position
1890674..1892209
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AA seq
511 aa
AA seq
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MLASIVAAIVCGVIGVGAGYIYRKNIAEGKIGQAEVEAQRIISTAQQNAEARKKELVLEG
KEEVHKLRTDAERENKERRSELQRMERRLLQKEEHLDKKFESIEKKEESLQRKEDEVTKI
QEKIEALHAQEMAELERISGLTYDEAKELLLCNVQSEVKHETAQMIKMMEDEAKEEAEGK
AREIIATAIQRCAADHVAETTVSVVSLPNDEMKGRIIGREGRNIRAIETLTGVDLIIDDT
PEAVILSCFDPIRREIARIALEKLIADGRIHPARIEEMVEKARKEVNQKIREAGEQATYE
TGVHGLHPELIKILGRLRYRTSYGQNVLRHSIEVSQLAGIMAAELGVDETLAKRAGLIHD
IGKALDHELEGTHVSIGAEVAKKYGESKLSINCISAHHGDEEPRSIEAVLVSAADAVSAA
RPGARRETLENYLKRLTKLEEIAKSFDGVEDCFAIQAGREIRVMVKPEKIDESDCVLLVH
DIVKRIEAELEYPGQIKVVVIRETRMIDYAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttagctagcattgtcgcagcaatcgtctgcggcgtcataggcgtaggcgcagggtat
atttaccgcaagaacattgccgaaggcaagatcgggcaggccgaagtagaagcgcagcgg
attatttccacggcgcagcagaacgcggaagcccgcaagaaggaactggtcctggaaggc
aaggaagaagtgcataaactgcgtacggacgccgaacgggaaaataaggagcgccgcagc
gaattacaacgcatggaacggcggttgctgcagaaggaagaacatttagacaagaaattt
gagtccatagaaaagaaagaggaatcgttgcagcgtaaggaagacgaagtgacgaaaatc
caggagaagatcgaagcgcttcacgcccaggaaatggctgaactggaacggatttcgggc
cttacatacgacgaggcgaaggagctcctcctttgcaacgtgcagtcggaggtaaagcac
gaaacggctcaaatgatcaagatgatggaagacgaagcgaaggaagaagccgaaggaaag
gcgcgggaaattattgccacggcgattcagcgctgcgctgccgaccacgtagcggaaacg
acggtctccgtcgtatccctgccgaacgacgaaatgaaaggccgtattatcggccgggaa
ggccgtaatatccgggctatcgaaaccctgacgggcgtcgacctcatcatcgacgatacg
ccggaagccgtcatcttgtcgtgcttcgaccccattcgccgcgaaatcgcccgcatcgcc
ttggaaaagctcatcgccgacggacgtattcatccggcgcgcattgaagaaatggtggaa
aaagcccgcaaggaagtcaaccagaagatccgcgaagccggcgaacaggcgacgtatgaa
acaggcgttcacggcctgcatccggaactcatcaagatcctggggcgtctgcggtaccgt
acgagctacggccagaacgtactgcgccattctatcgaagtatcccagctggcgggcatt
atggccgccgagctcggcgtagacgaaacgctggccaagcgggccggtttgattcatgat
atcggcaaagccctggatcatgaattggaaggcacccacgtatctatcggcgcggaagtc
gccaagaagtacggcgaatccaagctgagcatcaactgtatttccgcgcaccacggcgac
gaagagccgcggagcatcgaagccgtcctcgtgtcggcggcggacgccgtatcggcggcg
cggccaggtgcaagacgggaaacgctggaaaactacctgaagcgattgacaaaactggaa
gaaatcgcaaaatctttcgacggcgtcgaagattgctttgccatacaggccggacgcgaa
atccgcgtcatggtcaaaccggaaaagatcgacgaatcggactgcgttctcctcgttcac
gacatcgtcaagcggatcgaggccgaactggaatatcccggtcagatcaaagtcgtcgtc
attcgggaaacgcgaatgatcgattatgcaaaataa
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