Megasphaera stantonii: DKB62_10195
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Entry
DKB62_10195 CDS
T05599
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
meg
Megasphaera stantonii
Pathway
meg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DKB62_10195 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_10195 (xseA)
Enzymes [BR:
meg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DKB62_10195 (xseA)
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DKB62_10195 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-ProteinID:
AXL21903
UniProt:
A0A346B1B0
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Position
2151170..2152381
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AA seq
403 aa
AA seq
DB search
MKYASVTDVVRRIKDDIQKDFRLQSVAMEGNIIGLKRASNGHYYMNLHDDACSIRAILFR
NRAGRMMDGIREGDHVVVIGSVNVYEKGGALSFIIERLFSQGIGSLQAEYERIKNELERD
GYFDAAHKQAIPRFPWTVGVLTSRTGAVLHDIRKIAAERNPYVDIRLFPIPVQGAGAEEK
IAAAVAKAGTRRDLDVLILARGGGSMEDLWCFNSPAVVKAIYGSAVPVITAIGHETDTTL
ADYAADIRAATPTHAAELAFPDVEEIELDLAAMSRQAWDMLMDAIEGRRRDTANLAARMQ
PRRYGAFLTEKRDRIRQMVQTGSRRLDVILAEKGGRMAGLQAALQALNPAALVRRGYGQL
EQQGRIVADIRRLDKECPLRIQLVDGAITTEIKEVDIYGKNDG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatgcctcagtgacagacgtcgtccggcgtatcaaggacgatatacaaaaagac
tttcgcctccaaagcgtagcgatggaagggaatatcatcggcctgaagcgggcgtccaac
ggccattactacatgaatctccacgacgacgcctgctcgatcagggccatcttattccgc
aatcgtgccgggaggatgatggacggcatccgcgaaggcgatcatgtcgtcgtcatcggc
tcggtcaacgtatacgaaaaaggcggcgcgttgtcgtttatcatcgagcgcctcttttcg
cagggcataggctcgctgcaggccgaatacgaacggataaagaatgaactggagcgggac
gggtatttcgacgccgcccacaaacaggcgattccccgctttccctggactgtaggcgtg
ctgacgtcgcgtacgggcgccgtgcttcacgatatccgcaagatagccgccgaacgcaat
ccctacgtggatatccgcctgtttcccattcctgtgcagggcgcaggagccgaagaaaaa
attgcagccgccgtggcaaaagccggaacgcgcagggatttggatgtcctcattctggcg
cgcggcggcggttccatggaagatctgtggtgcttcaacagtcccgccgtcgtcaaggct
atttacggctcggcggtgccggtcattacggctattggccatgagacggatacgacgctg
gccgattacgcggcggacatccgggcggcgacgccgacgcatgcggccgaactggctttt
cccgacgtagaggaaatcgagctggacttggcggccatgagccgtcaggcctgggacatg
ctgatggacgcgattgaagggcggcgccgcgatacggccaacctggccgcccgcatgcag
ccgaggcggtacggcgcctttttgacggaaaaacgagaccgcatccgccagatggtgcag
acggggagccgccgtctcgacgtgattttagctgaaaaaggcgggcgcatggccggcctg
caggctgcgctgcaggccctgaacccggcggctctcgtgcgccgcggatacgggcagctg
gagcagcagggacgcatcgtcgcggatatccgccggctggacaaagagtgtccgctgcgg
atacagctggtagacggcgcaattacgacggaaatcaaagaggtagacatatatggcaag
aacgacggataa
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