Megasphaera stantonii: DKB62_10200
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Entry
DKB62_10200 CDS
T05599
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
meg
Megasphaera stantonii
Pathway
meg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DKB62_10200 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_10200 (xseB)
Enzymes [BR:
meg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DKB62_10200 (xseB)
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DKB62_10200 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
ALIX_LYPXL_bnd
G-gamma
SIMPL
Tropomyosin
Vps5
Ham1p_like
DUF932
Motif
Other DBs
NCBI-ProteinID:
AXL21904
UniProt:
A0A346B1B1
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All DBs
Position
2152362..2152625
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AA seq
87 aa
AA seq
DB search
MARTTDKLKNFEANYEKLEEVVKALDSPDLTLKESLDLYEKAIKLSEACESALEYAKQRA
QALADIHERAEEDDGSDKTLEEGTLGL
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaacgacggataaactaaagaattttgaagcgaattatgaaaagctggaagaa
gtggtcaaggccctggattcgccagacttgacgcttaaggaatcgctggacttatatgaa
aaggccatcaagctttccgaagcttgcgaaagcgcgctggaatatgccaaacaacgggct
caggccctggcagatattcacgaacgggccgaagaggacgatgggtcagacaaaaccttg
gaagaagggacgttaggcttatga
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