Megasphaera stantonii: DKB62_10590
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Entry
DKB62_10590 CDS
T05599
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
meg
Megasphaera stantonii
Pathway
meg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DKB62_10590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_10590
Enzymes [BR:
meg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DKB62_10590
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DKB62_10590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
AAA_22
DEAD
UvrD-helicase
PhoH
nSTAND3
NTPase_1
SLFN-g3_helicase
AAA_16
AAA_12
HHH_2
PIF1
Herpes_Helicase
HHH
NPHP3_N
AAA_28
TraI_hel_assoc_N
T2SSE
AAA
AAA_5
TrwB_AAD_bind
MeaB
AAA_29
DUF815
cobW
ATP-synt_ab
NACHT
ABC_tran
MobB
HVO_0513_N
UvrD_C
AAA_24
AAA_23
CbiA
Thymidylate_kin
Mg_chelatase
ABC_ATPase
Flavi_DEAD
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AXL21974
UniProt:
A0A346B1I1
LinkDB
All DBs
Position
2231492..2233654
Genome browser
AA seq
720 aa
AA seq
DB search
MADMETVQGAVERVLFEAPDSDYIVFRIRREDDESLLTVTGNGPKPLVGDRIEIMGRWTQ
HKKYGRQMAASAWKRLIPDTADGIERFLASGAVKGIGPSLARRIVSAFGSQTMAVLEKEP
KRLLEIEGIGAKKLAVITESFYEEKQVNDLALDLETHGVSGRYAARLVQKYGEEALYVLT
EEPYRMIAEIDGIGFKTADQIALAYGMDPQSPERLAAGLTYVLQDMTQNGHVCIPDRELV
YRASLILRAEQLMLRDVLTEALAMGQLCADDYGGETYVYTLQAYEEERGVAERIREMAAY
TPPKPRRHVELFLDRWQESCQFQLAEGQREAVSQSLQSGMLVITGGPGTGKTTVVQAIIR
LAEQEGLRIVLCAPTGRAAKRLAETTERKAKTIHRLLVPEGFAGGRQVFEYNETKQLPAD
LVIVDEVSMLDMEMLYHLLQALSPRCRCILVGDADQLPSVGAGAVLHDIIQSEILPVVRL
QTIFRQKEGGRIVTNAHLINGGRLPVVNEDEEFRFVEIEREEQGADVICRLYAAETAEAG
DKFAVQVLSPMYKNPCGVDNLNAVIQSAVNGPQKGKGEHKAGKVTFRTGDKVMQKQNNYD
KGVFNGDIGEIFAVQDDIVYVRYPEQDIKYEGQEIDEITLAYAITVHKSQGSEYHTVIMT
LVNSHGIMLQRNLLYTAVTRAKGKVILVGTKAALRTAVQNVRTSRRFTLLAQRLREEEIC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatggaaacggtgcagggggcggtagaacgcgttttgtttgaggcccccgat
tcggattatatagtcttccgcattcggcgcgaagacgacgagtccctgctgacggttacg
ggaaacggcccgaagccgctggttggagaccgcatagaaatcatgggccggtggacccag
cataaaaagtatggccgccaaatggcggcgtcggcgtggaagcgcctcattcccgatacg
gccgacggcatcgagcggtttttggcgtcgggcgccgtcaagggcatcgggccgtctctg
gctcgccgtatcgtatcggccttcggcagccagacgatggccgtcctggaaaaggaacca
aaacgcctgctggaaatcgaaggcatcggcgcgaaaaagctggccgtcattactgaatcg
ttttatgaagaaaagcaggtcaacgacctggccttggatttggagacccacggcgtgtcg
gggcgctatgcggcgcggctcgtgcagaaatacggcgaagaagccctgtatgttctgaca
gaggagccgtaccgcatgattgccgaaatagacggcatcggctttaaaacggccgaccag
attgccttggcgtacggcatggacccgcagtcgccggagcggctggcggcgggcttgacg
tatgtccttcaagacatgacacagaacggccacgtatgtattcccgatagggagctcgtc
taccgggcgtccctcatcttgcgggcggaacagctgatgctgcgggatgtgctgactgaa
gcgctcgccatggggcagctttgtgccgatgactacggcggcgagacctatgtgtatacg
ctgcaggcctatgaagaagaacggggcgttgccgagcggatacgggaaatggccgcgtat
acgccgcctaagccgcggcggcatgtggaattgtttttagaccgctggcaggagtcgtgc
cagttccagctggccgaggggcagcgcgaagccgtatcccaatccctgcagtcgggaatg
ctggtcattaccggcggcccggggaccggcaagacgacggtcgtgcaggcaatcatccgc
ctggccgagcaggaagggctgcgcatcgtcttgtgcgcgcctacggggcgggcggcgaag
cgcctggccgaaacgacggagcgcaaggctaagacgattcaccgccttctcgtgccggaa
ggctttgccggcggccgacaggtcttcgaatacaacgaaacgaagcagctgcccgccgat
ttggtcatcgtcgacgaagtttccatgctggatatggaaatgctgtatcacttgctgcag
gcactgagcccgcgctgccggtgcatcctcgtcggcgacgccgatcagctgccgtcggtc
ggagccggcgccgtccttcacgatattattcagtccgaaatactccccgtcgtgcggctg
cagacgattttccgccaaaaagaagggggccgcatcgtgacgaacgcccatctcatcaac
ggcggccgcctgcccgtagtcaatgaagacgaggaattccgctttgtggaaattgaacgg
gaagagcagggagcggacgtgatctgccggctgtacgcggcagaaacggcggaggccggc
gacaagttcgccgtacaggtgctgtcgccgatgtataaaaatccctgcggcgtcgacaac
ttaaacgccgtcatccagtccgccgtcaacgggccccaaaaaggaaaaggcgagcataag
gcgggaaaggtgaccttccgtacaggcgataaggtcatgcagaagcagaacaactatgac
aagggcgtatttaacggcgacatcggtgagatttttgccgtgcaggacgacatcgtgtac
gtgcgctatccggagcaggacatcaagtacgaagggcaggaaatcgatgaaattaccctg
gcctatgccataacggttcataagagccaggggagcgagtaccatacggttatcatgacg
ctcgtcaacagccatggcatcatgctgcagcggaacttgctgtatacggcggttacgagg
gccaagggcaaggtcatccttgtcggtacgaaagcggccctgcgcacggccgttcaaaac
gtgcggacgagccggcgttttaccttgctggctcagcggctgagggaggaagaaatatgc
tga
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