Megasphaera stantonii: DKB62_11855
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Entry
DKB62_11855 CDS
T05599
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meg
Megasphaera stantonii
Pathway
meg03420
Nucleotide excision repair
meg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DKB62_11855
03430 Mismatch repair
DKB62_11855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meg03400
]
DKB62_11855
Enzymes [BR:
meg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKB62_11855
DNA repair and recombination proteins [BR:
meg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DKB62_11855
MMR (mismatch excision repair)
Other MMR factors
DKB62_11855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AXL22198
UniProt:
A0A346B255
LinkDB
All DBs
Position
2518686..2520839
Genome browser
AA seq
717 aa
AA seq
DB search
MMDLLQGLNDAQRQAVTTTEGCVRVIAGAGSGKTRALSYRFAFLVNELGIVPGHILCVTF
TNKSAAEMRRRIHNLTGDNDTGYVNTFHGFCVSVLQEDCHAVQYPKNFLVLDNADIDAML
QMIYEERGLTLRNMTFSAARDMIEMRKLVHEPEYYADMITMSLERLKRKYDEAASAADII
FYGYLYQEKKCFGLDYNDLIKFSLYIFKEHDDIRLKWQRRLEYIMIDEFQDIDLLQYELM
SVLWGYHKNLFIVGDPDQTIYTWRGANVKYLLEFDKAFPGTKTIVMMDNYRSTPQILAAA
NALIDNNVCRMAKSLRPTLPDGDAVVCHFAESPQAEGLWMAGRMKALRERGVPYKDMAVL
YRAHYVTRTVEEALLKEHIPYVIYSGVQFFSRKEIKDALSYLRIIAYKDDLSFRRIANVP
KRNLGKRRMAFLQEYADTRGCSLYEALVETMDDGLFKGTKARQFAALVESFAAEYEGRPV
SEVLSAILDTSGYEKVLRTEGSQERLDNLAELKQAVYEYETTCGEEVTLEHYLSHVALLT
NADAAPDDDKVKLMTVHAAKGLEFPYVFLCGLNEGIFPSRKVRTMQAMEEERRLAFVALT
RAERGLYLSEADGQHFDGAVRYPSRFILDMGPDVLAYDNPPPDSLVRATRDYIEYSSKYW
PDREGERTFASGQRVRHAVFGEGTVIDADMDRQAYVVQFDAMDTARMISFRVKLKAL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatggatttgctgcaggggctgaacgacgcccagcgtcaggccgtgacgacgacggag
ggctgcgtgcgggtcatcgccggcgccggctcgggcaagacgcgggccttgtcgtaccgg
tttgcctttttagtcaacgagctgggcatcgtgccgggccacatcctctgcgtcaccttt
accaacaagtcggcggcggaaatgcgccggcgcatccacaacctgacaggcgacaacgac
acgggctacgtcaatacgttccacggcttctgcgtatcggtcctgcaggaagactgccac
gccgtccagtatcccaagaattttctcgtcctcgataatgccgatatcgacgccatgctc
cagatgatttacgaggaacgggggctcacgctgcgcaatatgaccttttccgctgcccgg
gatatgatagaaatgcgtaagctcgtccatgagccggagtattacgctgacatgattacg
atgtccctggagcggctgaaacggaagtacgacgaagccgcgtcggctgcggatatcatc
ttctacggctacttgtaccaggaaaagaaatgcttcggcctcgattacaacgacctcatc
aagttttccctgtatattttcaaggaacacgacgacatccggctgaaatggcagcggcgg
ctggagtacatcatgatcgatgaatttcaggatatcgacctgctccaatacgagctcatg
agcgtattgtggggctatcacaagaatttgttcatcgtcggcgacccggaccagacgatt
tatacgtggcgcggcgccaacgtgaagtatctcctcgagtttgacaaagctttcccaggg
acgaagaccatcgtaatgatggataattaccgctcgacgcctcagattttggcggcggcc
aacgccctcatcgacaacaacgtgtgccgcatggccaagtctctcaggccgaccttgcct
gacggcgacgccgtggtctgtcattttgccgaaagcccccaggccgaagggctgtggatg
gctgggcgcatgaaggccttgcgcgaacgaggcgtgccttacaaggacatggccgtcctg
taccgggcccattacgtgacgcggactgtggaggaagcgctgttgaaggaacacataccc
tacgtcatatacagcggcgtccagttttttagccgcaaggaaatcaaggatgctctcagc
tatttgcgcatcatcgcctataaagacgacctgtctttccggcggatcgccaacgtgccg
aagcgcaatctgggcaagcggcgcatggcctttctgcaggaatacgccgacacccgcggc
tgctccctgtacgaagcgctggtcgaaacgatggacgacggcctgtttaaggggacgaag
gcccgccagttcgcagcgctcgtcgagtcctttgccgccgagtacgagggccggcccgtg
tcggaggtcctgtcggcaatccttgataccagcggctacgagaaagtccttcgtaccgaa
ggcagccaggagcggctggacaacctggccgaactcaagcaggccgtgtacgagtatgaa
acgacgtgcggcgaggaagtcacgctggagcattatttgtcccacgtggccttgcttacc
aacgccgacgccgcgccggatgacgacaaggtcaagctcatgacggttcacgccgccaag
gggctggaatttccctacgtattcctgtgcggtctgaacgaaggcattttcccgtcgcgg
aaggtgcggacgatgcaagccatggaagaagaacggcggctggccttcgtagccctgacg
cgggccgaaaggggcttatatttgtccgaagcagacgggcagcacttcgacggcgcagtc
cgctatccgtcgcggtttatcctggatatgggcccggatgtgctggcgtatgacaatccg
ccgccggacagcctcgtccgggcgactcgggactacatcgagtacagcagcaaatactgg
cctgaccgggagggcgaaaggacctttgcgtcaggacagcgggtacggcacgccgtcttc
ggcgaggggaccgtcatcgacgccgatatggaccggcaagcctacgtcgtgcagttcgat
gccatggacacggcgcggatgatttcgttccgcgtgaagctgaaagccctgtaa
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