Methylotenera versatilis: M301_0329
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Entry
M301_0329 CDS
T01247
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
meh
Methylotenera versatilis
Pathway
meh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M301_0329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meh03021
]
M301_0329
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_0329
Enzymes [BR:
meh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M301_0329
Transcription machinery [BR:
meh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M301_0329
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M301_0329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ADI28716
UniProt:
D7DLN2
LinkDB
All DBs
Position
362750..366922
Genome browser
AA seq
1390 aa
AA seq
DB search
MSYSFTEKKRLRKSFAKRESVQEIPYLLAMQLESYKAFLQAEIPADKRTEDGLQSTFASV
FPIISHSGNARLDYVSYQLGAEPFDVKECQQRGLTYAAPLRVKVRLTIMDKEASKPTVKE
VKEQEVYMGELPLMTENGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDYLYFRIDRRRKMPVTILLKALGYTPEQIIATFFDFDTFHVSAKG
VEFTLVPDRLRGEVAKFDIVAKDGEVLVAKDKRITVKHIRDMEKAGVSKIAVPQDFILGR
AIGKNIVDKETGEIVANANDEITESLLEKLIDAKVGEINTLYSNDLDHGDYISQTLRIDE
IPDQYSARVAIYRMMRPGEPPTEDSVEALFNGLFFNEDRYDLSRVGRMKFNRRAFPEKAE
DRQSNWMRKFYETVGPRGAEGAYILSNDDILAVIGVLLELRNGRGEIDDIDHLGNRRIRS
VGELAENQFRTGLVRVERAVKERLSQAESDNLMPHDLINAKPVSSAIREFFGSSQLSQFM
DQTNPLSEITHKRRISALGPGGLTRERAGFEVRDVHSTHYGRMCPIETPEGPNIGLINSL
ALYARTNEYGFLETPYRRVEGNKVSDTIDYLSAIEESQYMIAQANTDLDAKNMFVEDLVS
SRHHNEFTMTQPDRVQYMDVAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRA
EKAVVGTGIERTVAVDSGTTVQARRGGLVDYVDSGRIVVRVNDDEAKDGEVGVDIYNLTK
YTRSNQNTNINQRPLVRVGDKLARGDVIADGASTDMGELALGQNMLVGFMPWNGYNYEDS
ILISERVVADDRYTSIHIEELTVVARDTKLGAEEITQDISNLSERMLGRLDEVGIIYIGA
DVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFT
REGLERDSRAQQIIDDQLTHYKQDLADQMRIVEDDAFGRIRRLIEGKTATGGPNKLKKGD
VLTAEYLASVGRYDWFDIRLTDEETARQLEQLKDSLAQARVNFDSKFEEKKRKLTQGDEL
PAGVQKMVKVYLAVKRRIQPGDKMAGRHGNKGVISKICPIEDMPHMADGTPMDIVLNPLG
VPSRMNIGQILEVHLGWAAKGLGLRIDEMLREEAKVADIRKFLEQIYNDSTGKKEDINSF
TDTEVLELARNLTNGVPFATPVFDGAAESDIKAMLDLAYPDDAARTKQLKFHAGKTQVTL
FDGRTGDAFERPVTVGYMHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGE
MEVWALEAYGASYTLQEMLTVKSDDVTGRTKVYENIVKGEHKIDAGMPESFNVLVKEIRS
LAIDIDLDRN
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgagctattccttcaccgaaaagaaacgccttcgtaaaagtttcgccaagcgcgaaagt
gttcaagaaattccatacttacttgcaatgcagttagagtcatacaaagcattcttgcaa
gcagaaatcccagcagataagcgtacagaagatggtttgcaatctactttcgcttcagtt
ttccctatcatcagccattcaggtaatgcgcgtttagattacgttagctatcaattaggc
gctgagccttttgatgtaaaagagtgtcaacagcgtggtttaacttacgctgcacctttg
cgcgtaaaagttcgtttgaccattatggacaaagaagcttctaagccaacagttaaagaa
gtgaaagagcaagaagtttacatgggcgaattgcctttgatgacggaaaatggctcattt
gtgattaacggtactgagcgtgtgattgtttctcaattacatcgtagcccaggcgtgttc
tttgagcatgatcgtggtaaaacacatagctcaggtaaattgctattctcagcacgtatc
attccttaccgtggctcgtggttagatttcgagtttgatcctaaagattacttgtatttc
cgtatcgatcgtcgccgtaaaatgccagtgaccattttgcttaaagcacttggttatacg
ccagagcaaatcatcgctacattctttgacttcgatactttccacgtcagtgcaaaaggt
gttgagttcacattagtgcctgatcgtctacgtggcgaagtggctaaatttgacatcgta
gctaaagatggtgaagtattagttgcaaaagacaagcgtattaccgtaaaacatatccgt
gatatggaaaaagctggcgtgagcaaaattgctgtgccacaagactttattctaggtcgt
gcgattggtaaaaatattgttgataaagaaactggcgaaatcgttgcgaatgccaatgat
gaaattacagaatcattgttagagaaattaattgacgcaaaagtaggcgaaattaatacc
ctttattctaatgacttagatcacggcgactatatctctcaaacattacgtattgatgaa
attcctgatcaatatagtgcacgtgttgcgatttaccgcatgatgcgcccaggcgagccg
ccaactgaagattcagtagaagcgctatttaatggtttattcttcaatgaagatcgttat
gatttgtcacgcgtaggtcgtatgaagtttaatcgtcgtgcattccctgaaaaagcggaa
gatcgtcaatcaaactggatgcgtaagttctacgagacggtaggtccacgtggtgctgaa
ggtgcgtacattctttcaaatgacgatatccttgctgttattggcgttttgctagagtta
cgcaatggccgtggcgaaatcgatgatattgaccatttaggtaatcgtcgtattcgttca
gtaggcgagttggcagaaaatcaattccgtacaggtctagttcgtgtagagcgcgctgtt
aaagagcgtttgtcacaagctgaatcagacaacttgatgccgcatgacttgattaacgct
aaaccagtatctagcgcaattcgtgaattctttggctcaagccaattgtcacagtttatg
gatcaaaccaatccattgtctgaaattacgcataaacgccgtatctcagcacttggccct
ggtggtttgacacgtgaacgcgcaggtttcgaagtgcgtgacgttcactcaacccactat
ggtcgtatgtgtccgattgaaacacctgaaggtccaaacattggtttgattaactcattg
gctttgtatgcacgtactaatgaatacggtttcttagaaacaccgtatcgtcgtgtagaa
ggcaataaagtgtctgacactattgactatctttcagccattgaagaaagccagtacatg
atcgcgcaagcgaacacagacttagatgctaagaacatgtttgttgaagacttggtctca
tcacgtcatcacaacgagttcaccatgacgcagccagatcgcgttcaatatatggacgtt
gcgcctggtcaaattgtatctgttgcggcttcattgattccattcttggaacacgatgat
gcgaaccgcgcattgatgggtgccaacatgcaacgtcaagcagtgccttgtctacgtgct
gaaaaagccgtggttggtacaggtattgagcgtactgtagcggtcgactctggtacgaca
gtgcaagcgcgtcgtggcggtttggtagattacgttgattctggtcgtatcgtggttcgt
gtaaacgatgatgaagcaaaagatggtgaagttggtgtagatatttacaacttaactaaa
tatacacggtcaaaccagaacacaaacattaaccaacgtccattggttcgcgtaggcgat
aaattggcacgcggtgatgtgattgccgatggtgcttcaacggatatgggtgagttggct
ttaggtcaaaacatgttagttggctttatgccttggaatggttataactacgaagactcg
attttgatttcagagcgcgtagttgcagatgaccgctacacttcaattcacattgaagag
ctaactgttgttgctcgcgatacgaaacttggtgctgaagaaatcacacaagatatttca
aacctaagcgagcgtatgttaggtcgtttggatgaagtgggtattatttatatcggtgct
gatgttgaggcgggcgatgttctagttggtaaagtgactccaaaaggtgaaacacaactg
acgccagaagagaaattgttacgcgctattttcggtgaaaaagcttctgatgttaaagat
acttcattgcgcgtgccatcaggcatgagcggtacagtgattgacgtacaagtgtttaca
cgtgaaggtttagagcgtgattcacgtgcgcaacaaattattgatgatcagttaactcat
tacaaacaagacttagccgaccaaatgcgtattgttgaagacgatgcattcggacgtatt
cgtcgcttgattgaaggtaaaactgcaactggtggtcctaataaactgaaaaaaggcgat
gtgctaactgctgagtatttagcttcagtaggtcgctatgactggtttgatattcgctta
actgacgaagaaacagcacgtcaattagagcaattgaaagacagtttggctcaagcacgt
gttaactttgacagcaaatttgaagagaaaaaacgtaaattaacgcaaggtgatgagttg
ccagctggcgtacagaaaatggttaaagtgtatttagctgttaaacgtcgcattcagcct
ggtgataaaatggccggtcgtcacggtaacaagggtgttatttcaaaaatctgtccaatc
gaagatatgccgcacatggcggatggtacacctatggacatcgtgttgaacccactaggt
gttccttcacgtatgaacatcggtcagattctagaagttcacttgggctgggctgctaaa
ggtctaggtttgcgtattgatgaaatgttacgcgaagaagctaaagtagctgatatccgt
aagttccttgagcaaatctacaacgacagcacaggtaaaaaagaagatatcaattcgttt
actgacactgaagtattagaacttgcacgtaacctaacaaacggcgtgcctttcgcaacg
ccagtatttgatggtgcagcagaatctgatattaaagcgatgctagatttagcttacccc
gatgatgcagcgcgtactaaacagttgaaattccatgctggtaagacgcaagtgacgtta
ttcgatggtcgcacaggtgatgcatttgaacgtccagtcactgttggttatatgcacgta
ttgaaattgcatcacttggttgatgacaaaatgcatgcacgttcaacaggtccttactca
ttagtcacgcaacaaccattgggcggtaaagcacaatttggtggtcagcgtttcggtgag
atggaggtttgggcgcttgaagcttatggtgcttcatatacattacaagaaatgctgaca
gtgaagtctgatgacgtcactggtcgtacaaaagtatatgaaaatattgttaaaggcgaa
cacaaaattgatgctggtatgccggaatcattcaacgtgttagtgaaagaaattcgttca
cttgctatcgacattgacctagacagaaactaa
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