Methylotenera versatilis: M301_0404
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Entry
M301_0404 CDS
T01247
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meh
Methylotenera versatilis
Pathway
meh03420
Nucleotide excision repair
meh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M301_0404
03430 Mismatch repair
M301_0404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_0404
Enzymes [BR:
meh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M301_0404
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M301_0404
MMR (mismatch excision repair)
Other MMR factors
M301_0404
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADI28790
UniProt:
D7DM79
LinkDB
All DBs
Position
complement(434981..437179)
Genome browser
AA seq
732 aa
AA seq
DB search
METESTLLTGLNNKQLEAVTLPQQSALILAGAGSGKTRVLTARIAWLIQTGQVSPTGLLA
VTFTNKAAKEMLTRITASLPINTRGMWVGTFHGLCNRLLRAHHREAGLPASFQILDISDQ
LSVIKRLMKLMNVDDEKFPPKQVQNFINGCKDEGLRAHAVEAYDPHSTKMREIFDEYDKQ
CQRDGVADFAELLLRCYELLERDTNIRGHYQSRFKYILVDEFQDTNRLQYLWLKLLAGED
NCMFAVGDDDQSIYGFRGARVGNMRDFEKDFKVQNVVKLEENYRSHSNILDAANAIISHN
NNRLGKNLWTSAGAGEPVRVYDAYNDTDEAQFIVDEIKMLHCEGTSLGEIALLYRSNAQS
RILEQALFNANLPYRVYGGLRFFERAEIKHALAYMRLIANANDDTALLRVINFPTRGIGA
RSLEQLQEVARAENCSIWQAAINKVGNGKLGAKGIEGFVALIRQMVDNAYGISLRELTEL
AITMSGLVAHYENDKEGEDRIENLKELVTAAVSFTNRDFGNHNNVDGETEQDLLTQFLSH
ASLEAGEHQADVGREALQLMTVHASKGLEFKAVFISGLEEGLCPHEQSLFENAGLEEERR
LMYVAVTRARQRLYLSHAQSRMLHGKVRYGIPSRFLDEIPEELLKRLNSKPVARSGSNRD
YSELPAMMSKQQSSNQKSAMPWKIGQQVAHTKFGNGVIVSYEGNANDMRVQVNFGREGLK
WLALEFAKLTPI
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgaatctacattactcactggccttaataataagcagctagaagctgtcacc
ctaccacaacaatctgcactgattttagctggtgcaggtagtggtaaaacacgcgtcctc
acagcacgtatcgcatggttgattcaaactgggcaagtttcacccacaggtttattagcc
gtgacgtttaccaacaaagccgctaaagaaatgctcacgcgtattacggcatcattgcca
atcaatacacgtggcatgtgggtaggtacatttcacggactgtgtaatcgcttgttgcgt
gctcaccatcgcgaagctggcctaccagcaagctttcagattttagacatttcagatcag
ctctctgtgattaaacgcttgatgaaactcatgaatgtggatgatgagaagtttccacct
aagcaagtgcaaaactttatcaatggctgtaaagatgaaggcttacgtgcgcatgctgta
gaggcctatgacccgcattccaccaaaatgcgcgagatttttgatgagtacgacaagcaa
tgtcaacgcgatggcgtggctgactttgccgaattgctattgcgttgctacgagttgctg
gaacgcgataccaatatccgtggccattaccaaagccgctttaaatatatcttagtggac
gagtttcaagataccaaccgcctgcaatatttatggctaaaactgctcgctggtgaagac
aactgcatgttcgctgtgggcgatgatgaccaatccatctatggcttccggggtgcacgc
gtgggcaatatgcgcgactttgaaaaggatttcaaagtacagaatgttgtaaagctagaa
gaaaactaccgctcacacagcaatattctagatgcagctaacgcgattatttcacacaat
aataaccgcttaggtaagaacttatggactagcgcaggcgcgggtgaacctgtgcgtgtg
tacgatgcttataacgataccgatgaagcacaattcatcgtcgatgaaattaaaatgctg
cattgcgagggcacatcattaggtgagattgccctgctctatcgctccaatgcgcagtca
cgcattttagaacaagcactgtttaacgccaacttgccttatcgtgtgtatggcggttta
cgcttttttgagcgtgccgaaattaagcatgcacttgcttacatgcgtttaattgccaat
gcaaatgatgacacagcgttgttgcgtgtcattaacttcccaacacgcggcattggtgcg
cgcagcctagaacagttacaagaagttgctcgcgcagaaaactgtagcatctggcaagca
gcgattaacaaagtcggtaacggtaagcttggcgctaaaggcatagaaggctttgtcgcc
ctgattagacagatggttgacaatgcttacggcattagcctgcgtgagctgactgagtta
gccatcaccatgtctggtttagtcgcccattatgagaatgacaaagaaggtgaagaccgt
atagaaaacttgaaagagttggtgactgctgccgtatcgtttaccaaccgagattttggc
aaccacaacaatgtggatggcgaaaccgaacaagatttactcacacaatttctaagccat
gccagcctagaagcaggtgagcaccaagcagacgtcgggcgcgaagctttgcagttaatg
acagtgcacgcctccaaaggcctagaatttaaagctgtatttatcagcggcttagaagaa
ggcttatgtccgcatgagcaaagtttgtttgagaatgcaggcttagaagaagagcgccgc
ttaatgtatgtagcggtcactcgcgccagacaaagactgtatttaagccacgcacagagt
cgcatgctgcatggcaaagtgcgctatggtattccatcacgctttttagatgaaattcca
gaagagttactcaaacgcttaaacagcaagcctgtcgcaaggtctggcagtaaccgcgac
tatagcgagttgccagccatgatgagtaagcaacaaagcagcaaccagaaaagcgccatg
ccgtggaaaataggtcagcaagtcgcgcacactaagtttggtaatggcgtgattgtgagt
tacgaaggcaacgccaacgacatgcgtgtacaagtgaactttggtcgtgaaggcttgaaa
tggttagcgctggagtttgctaaacttacgccgatttag
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