Methylotenera versatilis: M301_1144
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Entry
M301_1144 CDS
T01247
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
meh
Methylotenera versatilis
Pathway
meh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M301_1144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meh03019
]
M301_1144
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_1144
Enzymes [BR:
meh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M301_1144
Messenger RNA biogenesis [BR:
meh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M301_1144
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M301_1144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ADI29528
UniProt:
D7DHJ3
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All DBs
Position
1280852..1282681
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AA seq
609 aa
AA seq
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MSNIPPLQTLHDVFGYSTFRGEQQAIVEHVTAGGDALVLMPTGGGKSLCYQLPALLREGV
GIVVSPLIALMQDQVDALKQLGVRAAFLNSSQDADEAREITAQLMRGHLQIVYVAPERLL
MSSFLSLLDEIEEGAGIALFAIDEAHCVSQWGHDFRPEYRKLTVLHERFPHVPRIALTAT
ADAPTRAEIVERLKLEEARQFVSSFDRPNIKYRVTQKANARQQLEAFLDSEHANDAGIIY
CLSRKKVEETAEWLKSRGWDALPYHAGLDASVRNQNQRRFLREEGVIMVATVAFGMGIDK
PNVRFVAHLDLPKSMEGYYQETGRAGRDDLPANAWMTYGLGDVVSMRKMLDSGDAPEERK
AVERQKLDALLGFCESTSCRHQTLLRYFGETHPGNCEQCDNCLSPVDTWDATQASRMALS
CVYRTGQRFGVVHLIDVLLGKNTPKIQQFNHHSLSTFGIGKGLTQSQWSSVYRQLVAGGY
LESDIEAYGGLKLAESAKPVLKGEAEVWLRQDVEVVAIRKVSKAERGSRAKEGYEEVADD
PLWHALKAKRMELAKEQGVPPYVIFHDSTLLEILNQKPGSLTEMSQITGVGQAKLERYGD
AFLEVLEDR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatccccccattacaaaccctacacgacgttttcggctattccacttttcgc
ggtgagcagcaggctattgttgaacatgttaccgctggtggcgatgcgttagtattgatg
ccaactggcggtggcaagtctttgtgttatcagttgccagctttgttgcgcgagggtgtt
ggtattgtggtctcgccccttattgcactgatgcaagaccaagtggatgcgcttaagcaa
ctgggtgtgcgagcggcgtttttgaactctagccaagatgccgatgaggcacgtgaaatc
accgcacagttgatgcgtgggcatttacagattgtgtatgtggcgcccgaacgtttactg
atgagcagttttttatcattacttgacgaaatagaagagggcgctggcattgcgcttttt
gccattgacgaggcgcactgcgtttcgcaatgggggcacgatttccgtcctgaatatcgc
aagcttactgtgttacatgagcgctttccgcatgtgccgcgtatagcactcaccgccacg
gctgacgcgccgacacgcgctgaaatcgttgaacggctaaaacttgaagaggcgcgccag
tttgtttctagtttcgatcgtccaaacattaaataccgcgtcacacagaaagccaatgcg
cgtcagcaattagaggcttttttagatagcgaacatgcgaatgatgcgggcattatctat
tgcttaagtcgtaaaaaagtagaagaaaccgccgaatggctaaaatcacgcggttgggat
gcattgccttaccatgcgggtttggatgctagtgtacgtaaccaaaatcagcgtcgattt
ctacgtgaagagggcgtgataatggtcgctactgtggcgttcggcatgggtatagacaag
cccaatgtacgctttgtggcacatttagatttacccaaaagtatggaaggctactaccaa
gaaactggccgggcggggcgtgatgacttgcctgctaacgcttggatgacttatggtctg
ggcgatgtggtcagcatgcgcaagatgttagattcaggcgatgcgccagaagaacgcaaa
gcagtcgagcgacaaaagttagatgctttgctaggtttctgtgagtccaccagctgccgc
catcaaaccttgttgcgttattttggcgaaacccacccaggcaattgcgagcaatgcgat
aattgcttaagtccggtcgatacttgggatgccacacaagcctcgcggatggcgctttca
tgcgtatatcgcacagggcagcgctttggtgtcgtgcatttaatcgatgttttattgggc
aaaaatacgccaaagattcagcaattcaatcaccacagtttaagcacattcggcataggt
aaaggcttaacgcagtcacaatggagcagtgtttaccgtcagttagtcgcaggcggttat
ttagaaagtgatattgaagcttatggcggcttgaagttagcagaatctgcaaagcctgta
ctaaaaggtgaggcagaggtgtggttgcggcaagatgtagaggtagttgccattcgtaaa
gtcagcaaggcagaacgtggtagccgtgccaaagaaggctacgaagaagtggctgatgac
ccgctatggcacgcactcaaagccaagcgtatggaactcgccaaagaacaaggcgtgccg
ccttatgtgatcttccacgacagcacgttgctagaaatactcaatcaaaaaccgggcagc
cttactgaaatgagccaaatcacaggtgtgggacaagccaagcttgagcgatatggcgat
gcgtttttagaagtgctggaagatagataa
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