Methylotenera versatilis: M301_1806
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Entry
M301_1806 CDS
T01247
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meh
Methylotenera versatilis
Pathway
meh03410
Base excision repair
meh03430
Mismatch repair
meh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M301_1806
03430 Mismatch repair
M301_1806
03440 Homologous recombination
M301_1806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_1806
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M301_1806
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M301_1806
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M301_1806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADI30183
UniProt:
D7DJE8
LinkDB
All DBs
Position
complement(2036180..2037391)
Genome browser
AA seq
403 aa
AA seq
DB search
MPGQVTPKAACIINPNQHGCSFPSKNLAGVGVMFYCLLGLRAEMRERGLFAEKPEPNLTE
LLDLVALGTVADLVKLDDNNRILVEQGLRRIRAGACSQGILALLRVAGRQPQSTNAQDLG
FYVGPRLNAAGRLDDMTLGIQCLLAESELEATTIAQRLQDLNVHRRSIEADMQDGASLSL
EEINIDNQFAISIYQEDWHQGVIGILASRIKERYHRPVIAFANAGDGLLKGSGRSIASLH
LRDALDLLSKHQPDLILKFGGHAMAAGLTIKQADFELFNQSFEAVVKSLITEADLESVLE
VDGNLSKSEMTFATAQALENQVWGQGFAPPLFYDEFEVLNQRLLGEKHLKLSLKKDASVI
DAIYFNHAEFLPDEIQAAYQLQTNSYNGTQKVQLNLRYVVVRD
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ttgccaggacaagtcacaccaaaggccgcttgtattattaaccctaatcaacatggttgt
agttttcccagcaagaatctggccggcgtaggcgtcatgttttattgcttactcggttta
cgtgctgaaatgcgagagcgtggtctttttgcagaaaagccagagccaaatttaacggaa
ttgctcgatttagttgcattgggtacagtggcagatttggtgaagcttgatgacaataat
cgcattctagtggagcaaggtttacgcagaatccgggcgggcgcttgttcgcaaggtata
ttggctttattaagagttgcaggccgtcagccgcaaagtaccaatgcacaagatttaggt
ttttatgtaggccctcgcttgaacgccgctggcaggctggatgatatgaccttgggcata
caatgtttactcgctgaatctgaacttgaagccacaactattgcacagcgattgcaagat
ttaaacgtgcatcgccgtagcatagaagctgacatgcaagatggcgcaagcctatcgttg
gaagagattaatatcgataatcaatttgccatcagcatttatcaggaagattggcaccaa
ggtgtcattggtattttggcatcgcgcattaaagagcgctatcatcgccctgtgattgcc
ttcgctaatgctggcgatggcttgcttaaagggtcgggtcgatctattgctagtttgcat
ttacgcgatgcgcttgatttgctcagcaaacatcaaccggatttaattttaaagtttggc
ggccatgccatggcggcaggcctcactattaaacaggctgattttgaattgttcaaccaa
agctttgaagctgtagtgaaaagcttgattactgaagccgatttggaatcagtgctagag
gtggatggtaatttgagtaaaagcgaaatgaccttcgcaaccgcacaagcgctggaaaac
caagtgtggggacaggggtttgctccaccgttgttttatgatgaatttgaagtgctgaat
cagcgcttattgggagaaaaacaccttaaacttagcctgaaaaaagatgcaagcgtcatc
gatgcgatttactttaatcacgccgagtttttaccagacgagattcaagccgcctatcag
ttgcaaaccaatagttataacggtacacaaaaagtgcagttgaatttgcgttatgtagta
gtgcgagactaa
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