Methylotenera versatilis: M301_1807
Help
Entry
M301_1807 CDS
T01247
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meh
Methylotenera versatilis
Pathway
meh03410
Base excision repair
meh03430
Mismatch repair
meh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M301_1807
03430 Mismatch repair
M301_1807
03440 Homologous recombination
M301_1807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_1807
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M301_1807
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M301_1807
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M301_1807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADI30184
UniProt:
D7DJE9
LinkDB
All DBs
Position
2037774..2039549
Genome browser
AA seq
591 aa
AA seq
DB search
MLKPPKPIFKFRESDDAVIATLIESGSPDWLAKILSSRLDKPMGFNSLYSNDLTDVEDPS
AIPDMDIAVSRIVRAINDEEKITLVCDHDMDGTGSAAVLWSALIDFFKVKDTLVNVVTSH
RLTEGYGITEPVAQRIIDLKPGLVISADKGSSDEPRIKKIAEAGIDVIVTDHHEIGANGP
PKSAIAVVNPIRVDSSYDKHVCGAGVAFLTMAKVRTALIQAGVRNHIPSIAPLLDYVAVA
TIADCVSMKPSKASTNRTFVKRGLQLINSKSRPCWEVFSSDLQGPVDAETIGFRLAPAVA
AAGRLDWAEIGFKFLISKTTQDAQKYWIELQHENALRKDIEKKLREKAIPEACKKLGQSI
VLFFEDGHSGVHGITASRLVEAFGKPAAIFSPKGAGVKNSTSRDEVKLASGSFRGIPGFN
VKEALSYVGDKYPELLLSHGGHVGAGGGSILIDSFDDFVIAYEEAVQAQIGDKELKPTIW
VDGELPLGVNDFDVLSELDKLEPWGRDFPYPTFKGKFEVRSIKKLGDGSHLKLSLYDGLN
SKDAIWFNAVQSGDEVLFTIGSNLSFVYSLKSNWYRNNRKIQLQIISQIND
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagccaccaaaacctatatttaaatttcgtgaaagtgatgatgccgttattgcc
acattgattgaaagtggatcaccagattggctggctaaaattctgtcctcaagattagat
aagcctatggggtttaattcactctattctaacgaccttaccgatgttgaggatccatct
gctatccctgacatggatatcgcagtcagtagaattgtacgagcaattaacgatgaagag
aaaatcaccctcgtatgtgatcatgatatggatggtactggatcagctgctgttttatgg
tctgcgctcattgattttttcaaagtcaaagacactttagttaacgtagtcactagccat
cgtttaacagagggttatggaattacagaaccagttgctcaaagaattattgatttaaag
cctggcttagtaatatccgcagataaaggtagcagtgatgagccaagaattaaaaaaata
gccgaagctggaattgatgtaattgttactgaccaccatgaaattggtgctaatggcccc
cctaagtcagccattgccgttgttaacccaattagggttgattcgagctacgacaagcat
gtatgtggcgctggggtggcttttttaacaatggcaaaagttcgaacagcattgattcaa
gctggagttagaaaccatattccaagcatagcaccccttttggattatgtcgcagttgca
actattgcagactgcgtatcaatgaaaccaagcaaagcttcaacaaatagaacatttgtg
aaacgtggtttgcaattaataaatagtaaatcacggccttgctgggaagtctttagttct
gatttgcaagggccagtcgatgccgaaactataggctttagactcgctcctgcagtagcg
gccgcagggagattagattgggctgagattggatttaaatttttaatatccaagactacg
caagatgctcaaaaatattggatagagttgcagcatgaaaatgccttacgaaaagatatt
gaaaaaaaattaagggagaaagctattcctgaggcatgtaaaaagctagggcaatccatt
gttttattttttgaagatggtcacagtggggtgcatgggattactgcaagtagattagtt
gaagcttttggaaaacctgcagcaatattttctccgaagggggcaggtgtgaaaaactcg
acctctagagatgaagttaagttagcatctggttcgtttcgaggtataccaggatttaat
gtgaaagaagcactctcctatgttggtgataagtatcctgaactattgctaagtcatggc
ggccatgtgggggctgggggaggctcaattttaattgattcatttgatgattttgtaatt
gcttatgaagaagcagttcaagctcaaattggtgataaagaattaaagcctacgatttgg
gttgatggagagttgccactaggagtcaatgattttgatgtgttaagtgagctggataaa
ttagagccttggggtcgagatttcccctatccaacttttaagggtaagtttgaagttaga
agcattaagaaacttggagatggtagccatttaaaattgtcgctgtatgatggcttgaat
tctaaagatgcgatttggttcaatgcagttcaaagtggtgatgaagtgctgtttactatt
gggagtaatttgagttttgtttatagtttaaaaagtaattggtatcgcaataacagaaag
atacaacttcaaataatttctcaaattaatgattaa
DBGET
integrated database retrieval system
