Methylotenera versatilis: M301_2489
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Entry
M301_2489 CDS
T01247
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
meh
Methylotenera versatilis
Pathway
meh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M301_2489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meh03021
]
M301_2489
Transcription machinery [BR:
meh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M301_2489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
CSN4_RPN5_eIF3a
Motif
Other DBs
NCBI-ProteinID:
ADI30849
UniProt:
D7DMS2
LinkDB
All DBs
Position
complement(2739550..2741487)
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AA seq
645 aa
AA seq
DB search
MARPKKSDQLAEKNKMEFVSPELQEASAEERRSRLKSLIVLGKERGYLTYAEINDHLPDD
VQNSEQIDGIIGMINDMGIQVYEEAPDAEVLLMSDAPPAVTDEDAVEEAEQALATVDSDF
GRTTDPVRMYMREMGTVDLLTRESEIEIARRIEDGLKHMVQAIAACPTTIAALLALVDKV
ENDELSVDDLVDGLIDSDVGAVADVVIEAAEDEDEVDEDIDEGEDEDGAKAAAISAEALA
KLKEEVVNRFTVVRAANKKMTEILPLRGSQDPQYQALLSEILVELTAFRFSPKQVEGLCD
QVRDLVETIRSHERKVLDFCVEKSGMPRLHFIKSFPGNESNLGWLAEELKADKPYIEKLI
RYNHSILDQQQRLIDLEKNVGIPIKELKEINKQMTTGEARARRAKREMIEANLRLVISIA
KKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGFKFSTYATWWIRQAITRSIADQARTIR
IPVHMIETINKMNRISRQILQETGVEPDPALLAEKMEMPEDKIRKILKISKEPISMETPI
GDDEDSHLGDFIEDGQTLAPVDAAIYASLRDATSEVLESLTPREAKVLRMRFGIEMNTDH
TLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSERLRSFLETGQD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaccaaagaaaagcgatcagttagcagaaaaaaacaaaatggagttcgttagc
ccggagctgcaagaagctagcgctgaagaacgccgctcacgtttaaaatctctaattgtc
ttaggtaaagagcgcggctacttaacctacgctgagattaacgatcaccttccagatgac
gtacaaaactctgagcaaatcgatggcattatcggcatgattaatgacatgggcattcag
gtgtacgaagaagcgcctgatgctgaagtattgctcatgtctgatgcaccacctgcagtg
actgatgaagatgctgttgaagaggctgagcaagcccttgctacagtagactcagacttt
ggacgtacaactgaccctgtgcgtatgtacatgcgtgaaatgggtacggtagatttgctt
acccgtgaaagcgaaattgaaattgcacgtcgtattgaagacggtcttaaacatatggtg
caagcgatagctgcttgcccaacgactattgctgccctattggcattggttgataaagtt
gaaaacgatgaactaagcgttgatgatttagtagatggcttgattgattctgatgtgggc
gcggttgctgatgtggtaattgaagcggcggaagatgaggatgaagttgatgaagatatt
gacgaaggtgaagatgaagacggcgcaaaagctgccgctatctctgctgaagcgcttgca
aaacttaaagaagaagtcgttaatcgctttacggtagtgcgtgcagcgaataaaaagatg
acagaaatcttgcctttaagaggctctcaagatcctcaatatcaagctttgttatcggaa
attttagttgaattaacggcattcagattctcgccaaaacaagtagaaggcctgtgcgat
caggtgcgcgatttagttgaaactattcgtagccacgaacgtaaagtgcttgatttctgt
gtagaaaaatcaggcatgcctagactgcatttcattaaatcgttcccaggtaatgagagc
aacttaggttggctggctgaagagttaaaagcagacaaaccatacattgagaaattaata
cgctataaccactcaattttagatcaacaacagcgtttgattgatttagaaaaaaatgtg
ggtattccaatcaaagagcttaaagaaatcaataagcaaatgacaactggtgaggcgcgc
gcgcgtcgtgctaagcgtgaaatgattgaagctaacttgcgtttggtgatttcgattgct
aaaaaatacacaaaccgtggcttgcaattcttagatctaattcaagaaggtaatatcggc
ttgatgaaagccgtagataagtttgaataccgtcgtggtttcaaattctcaacctatgct
acatggtggattcgtcaggcgattacacgttctattgccgaccaagcacgtaccattcgt
atccctgtgcacatgattgaaacgattaataaaatgaatcgtatcagccgtcagatttta
caagaaaccggtgtagagccagatccagcattgcttgctgagaaaatggaaatgcctgaa
gacaagattcgtaaaatcttgaaaatcagcaaagagccaatttcaatggaaacgccaatc
ggtgatgatgaagattcacacttaggtgactttattgaagacggtcaaacattagcacca
gtggatgccgcgatttacgcgagcctacgtgatgcgacaagtgaggtgttagagtcattg
acgccacgcgaagcaaaagtattacgtatgcgctttggtattgaaatgaatacagatcac
accttagaagaggttggtaagcagtttgatgtcacccgtgagcgtattcgtcaaattgag
gcgaaagcgttgcgtaaactacgtcacccaactcgttcagaaagattgcgtagtttctta
gaaactgggcaagattaa
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