Methylotenera versatilis: M301_2595
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Entry
M301_2595 CDS
T01247
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
meh
Methylotenera versatilis
Pathway
meh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M301_2595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_2595
Enzymes [BR:
meh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
M301_2595
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M301_2595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
ADI30952
UniProt:
D7DNF1
LinkDB
All DBs
Position
complement(2838498..2839286)
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AA seq
262 aa
AA seq
DB search
MKIISLNLNGIRSATNKGVQTWLQTQNADVVCMQEIKAQQADMTPEMLNPAGYYGYFHYA
EKKGYSGVGIYCKAKPDAVIEGLGGSNDGVQDIDSEGRYLECQFGNLSVISLYLPSGSSG
EERQAFKFSVMTRFMLHMQALIKSGREIIICGDWNIAHKEADLKNYKGNKKNSGFLPEER
AWLTTLFDEVGWVDVYRTLHPNTTDECYTWWSNRGQAYAKNVGWRIDYQIATPAIAAKAV
STSVYKAERFSDHAPLIVEYLD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgaagattatatcgctaaacctgaatggcatacgctctgcaacaaataaaggtgtgcaa
acttggctacaaacgcaaaatgcagacgtagtgtgtatgcaggaaataaaagcccaacaa
gcggatatgacgccagaaatgctcaacccagctggctattatggctattttcactatgca
gaaaagaaaggctatagcggcgtaggtatttattgtaaagccaagccagatgccgtgatt
gaaggtttgggtggctcaaatgatggtgtgcaagatatcgatagcgaaggacgttattta
gaatgtcagtttggcaacttaagcgtaatttcactctacttgccaagtggctctagtgga
gaagagcgccaagcctttaagttcagtgtgatgacacgctttatgctgcatatgcaagcg
ctgattaaaagtggtcgtgaaatcatcatttgcggtgattggaatattgcccacaaagaa
gctgaccttaaaaactacaaaggcaataagaaaaattcaggtttcttaccagaagagcgt
gcatggctgactactttatttgatgaagttggctgggtagatgtctatcgcactttacac
cccaatactaccgatgagtgctacacatggtggagcaatcgcgggcaggcttatgctaaa
aacgtaggttggcgtattgattatcaaattgctacgccagcaatagcggctaaggcggtt
tcaactagtgtttataaggcggagaggtttagtgatcatgcgccgctgattgttgaatac
ttggattag
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