Methylacidimicrobium sp. B4: MacB4_08770
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Entry
MacB4_08770 CDS
T11926
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mehb Methylacidimicrobium sp. B4
Pathway
mehb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mehb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MacB4_08770 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mehb03021
]
MacB4_08770 (rho)
03019 Messenger RNA biogenesis [BR:
mehb03019
]
MacB4_08770 (rho)
Transcription machinery [BR:
mehb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MacB4_08770 (rho)
Messenger RNA biogenesis [BR:
mehb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MacB4_08770 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSR84309
LinkDB
All DBs
Position
1852543..1854012
Genome browser
AA seq
489 aa
AA seq
DB search
MNADEIGQEKGEPSKSGASTGTSPWEAGAPSEEQRQPRSGHPARPAESRGGEQPNRKEGG
GEWSRPLATGQPLSLSELQHLSFAELQLKAGEYQIENPGLLRKHELIFETLRRHAQRNGP
IFGDGVLEVLSEGYGFLRSPAYNYFPCPEDVYVSPALIRRNGLKKGNLVSGPIRHPKEKE
RYFSLLQVDLVEGEEPDKVRNRIFFDNLTPLFPNRRIFLEGKSKDASLRVIDLVTPIGFG
QRGLIVAPPRTGKTVLMQKIANGVSENHPQAHLIVLLVDERPEEVTDMERSVRGEVISST
FDETPERHVQVAEMVIERAKRLAETKVDVVILLDSLTRLARAYNTLQPHSGKILTGGVDA
NALQKPRRFFAAARNLEEGGSVTILATALIETGSKMDDVIFEEFKGTGNMEVHLDRALVD
KRIYPAINIPKSGTRKEELLYHPDEIARIHVLRRALSSVPPVEAMELLLERLRKTKSNVE
FLLSMNLKE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggatgaaatcggacaggagaagggtgaaccttcaaagagtggcgcatcgacc
gggactagtccatgggaagcgggcgcgccctccgaagagcagcggcagcctcggagcgga
cacccggcccggcctgccgaatcccgcggcggtgagcagcccaatcgcaaggaaggaggt
ggggagtggtctcgtcctcttgcgaccggccagccgctcagcctgagcgagctccagcac
ctttcctttgcggagctccagctgaaagccggggagtatcagatcgagaatcccgggcta
ctccggaagcacgagttgatcttcgagacgttgcgtcgtcatgcccagcgcaacggtccg
attttcggagacggggtcctggaggtgctctccgaggggtatggcttcctgcggtcgccc
gcctacaactactttccttgtcccgaagacgtctacgtctctcctgcgctgatccggcgc
aacggcctcaagaagggcaacctggtttcgggccccattcgtcacccgaaggagaaggag
cgatatttctcgcttttgcaggtcgatcttgtcgaaggggaagagccggacaaggtccgc
aatcgcatctttttcgacaacctcacccccctctttcccaaccgtcggattttcctcgaa
ggaaagtcgaaggacgcttccctgcgggtcatcgatctggttacgccgatcggcttcggt
caacgcggtttgatcgtggctcctccgaggaccgggaagaccgtcctgatgcagaagatc
gccaacggggtcagtgaaaatcatcctcaggcgcatctgatcgtccttctggtcgacgaa
cggcccgaagaggtgaccgatatggagcgctccgtccgcggcgaggtcatcagctcgacc
ttcgatgagacaccggagcgccatgtccaggtggccgaaatggtgatcgagcgggcgaag
cgcctggcggagacgaaggtggacgtggtcatcctgctcgactcgctgacccggttggcg
cgtgcgtacaacaccttgcagccccatagcggaaaaattttgaccggaggcgtcgacgcc
aatgcgctgcagaaaccgcggcgcttttttgcggcggcgcggaacttggaagaaggcggg
agcgtgacgatcctggccacggccctgatcgagaccgggtcgaagatggacgacgtcatc
tttgaggaattcaagggaaccggcaacatggaggtccatctcgaccgtgcgctcgtcgac
aagcgaatctacccggcgatcaacatccccaagtcgggtacgcgcaaggaggagctcctc
tatcatcccgacgagattgcgcggattcatgtcttgcgccgcgcgctttcctccgtacct
ccggtggaggccatggagctgctgctcgagcggttgcgcaagaccaagagcaacgtcgag
ttcctcctttcgatgaatctcaaggagtag
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