Methylacidimicrobium sp. B4: MacB4_10520
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Entry
MacB4_10520 CDS
T11926
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
Organism
mehb Methylacidimicrobium sp. B4
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
CEP162_C
Motif
Other DBs
NCBI-ProteinID:
QSR84611
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Position
2240195..2244028
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AA seq
1277 aa
AA seq
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MSTRAWQRVNFGKIVESVPLPNLIAHQIRSYEEFLQLGVPTGERKPEGLHGVFLEVFPIE
SYDGKVRLEYLSYDATPPKFSPLHCLQNGETYAAALYVTFRLRDENGIKEERVYMGELPL
MTEHGSFVINGAERVIVSQLHRSPGICFESSLHMNGKMLYSFRVIPDRGTWLEVAFDTSD
LLHVHLDRRKKRRKFLVTTLLRALGHGSDEEILSLFYPVEDLDLEAAPPSDEDLPHKVLV
CEARDPRDADKVLVRGLEPLTKTAVRLLLEADVKVVRVVDIREDDTIVKCLRRDAARDQT
EALKEIYRRLRPGDPPTEANAKLLLKRLLFDPKRYDVGRVGRYKLNQKLGIEASPDTRTL
TPEDIVAATRYLISLQHGEGTTDDIDHLGNRRVRSVGELVASQCRIGLARTERLVKERMT
LFDVNAEGMTPQKLINPKALSATIRDFFARSQLSQLMDQINPLSELTHKRRLSALGPGGL
SRERAGFEVRDVHPSHYGRICPIETPEGPNIGLIASMSCFSRFNDYGFLETPYRKVVNGR
ATNEIAYLSADQEENVIIGMASTPVAESGLIQGKRVAVRFRGEFMEVDREKVNYLDVSSK
HMVSVATALIPFLEHDDANRALMGSNMQRQAVPLLSPEAPIVGTGMERRVVEDVGAVLLS
DVEGKVVSVTGTEIVIEPTAGEVEKRKRGKHESGLRTLSLRKFMRSNAGTCINQKPIVRV
GEMVKRGDPLADGPSTANGELALGQNLVVAFMPWNGYNFEDAIVLSERLVKEDLFTSVHV
DEFEIVARDTKLGPEEITRDIPNVGDDALKNLGSDGIVRIGAEVKPGDILVGKISPVSET
ELAPEERLLRAIFGDKAADVKDSSLRVPSGTSGIVMDVRVSSHQSKAEKEKLGMSEAKQK
IKEIEGRYEQKENELKEELTQALSNILLNEKIPLDVVDAETGEILIPANRKITKTLLRKM
AACCDHIEIDPSPIRTKIFEIIGSFESKFEQLRNDKEGELDQVESREEIEPGIVKQVKVY
IASKRKISIGDKMAGRHGNKGVVSRIVPVEDMPFLPDGTPVDIVLNPLGVPSRMNVGQVL
ETHLGIAARKLGFAVATPVFDGVKEEEIRKFLREAGLDEDGKTYLYDGRTGDRFDQRVVV
GVIYMMKLNHMVADKIHARAVGPYALVTQQPLGGKAQYGGQRFGEMEVWAMEAYGAAYTL
QEMLTVKSDDVSGRTRIYETIVKGENFLEPGRPESFNVLVKELQGLCLDPKIGVRGASEL
DLADGEARRAPAGPEAA
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaagagcttggcagcgagtaaacttcggaaagatcgtagaatcggtacccttg
ccgaacctgatcgcgcatcagattcgctcctatgaggagtttctccagctgggcgtgccc
acgggcgagcggaagcccgaagggctccacggggtcttcctggaagtcttcccgatcgag
agctatgatggcaaggtccgcctggaatacctctcctacgacgcgacaccgcccaagttc
tcgcctctccactgcctgcaaaacggcgagacctatgccgccgccttgtatgtgaccttt
cgtctgcgcgacgagaacgggatcaaggaagagcgcgtctacatgggcgagcttcccttg
atgaccgagcacggaagcttcgtgatcaacggggctgagcgagtcatcgtcagtcagctc
caccgttctcccgggatctgcttcgagtcgagcctccatatgaacgggaagatgctctac
tccttccgcgtgattccggatcggggcacctggctcgaggtcgccttcgacacgagcgac
cttctccatgtccacctggaccggaggaagaagcggaggaagttcctcgtgacgacgctg
ctgcgggctctcgggcatgggagcgatgaggagatcctgagcctcttttacccggtggaa
gacctcgatctcgaagcggctccgccgagcgacgaagacctgccccacaaggtcttggtc
tgcgaggcgcgcgacccgcgcgatgcggacaaggtgctggtgagggggctggagccgctc
acgaagacggccgtccgccttctcctggaggctgacgtcaaggttgtccgcgtcgtcgac
atccgggaagacgacacgatcgtcaaatgcctgcgccgtgatgcggctcgcgatcagacc
gaggcgctcaaggagatctatcggcggctgcgacctggggatccgccgaccgaggcgaat
gcgaagctcctgctcaagaggctcctcttcgatccgaagcggtacgacgtgggacgggtc
gggagatacaagctcaatcagaagctggggatcgaagcgagcccggacactcgtacgctc
acacccgaggatatcgtagcggccacccgctacttgatctccctccaacatggggaaggg
acaacggacgatatcgaccatttgggcaaccggcgcgtgcggagcgtcggcgagctcgta
gcgagtcagtgccggatcggcctggctcggaccgagcggctcgtcaaggagcggatgacc
ctcttcgatgtgaacgcagagggaatgacaccgcagaagctcatcaatccgaaggcgctt
tcggcaacgatccgcgacttcttcgcccgcagccagctctcccagttgatggatcagatc
aatccgctctccgagcttacgcacaagcggcgtctttcagcccttgggcctggcggtctt
tctcgcgagcgggcgggcttcgaggtgcgcgacgttcatccctcccactatgggcgcatc
tgcccgatcgagactccggagggaccgaacatcggcttgatcgcctcgatgtcctgcttc
agccgcttcaacgactatggttttctggagacgccctaccggaaggtggtgaacggcagg
gcgacgaacgagatcgcctatctgtcggccgatcaggaagagaacgtcatcatcggcatg
gccagcactcccgtcgcagagagcgggctcatccagggaaagcgtgtcgccgtccgcttt
cgcggggagttcatggaggtcgatcgggagaaggtcaactacctcgacgtctcgtccaag
catatggtctcggtcgcaacggcgctcatcccgttcctggagcatgacgacgccaaccgc
gcgctgatgggatcgaacatgcagcggcaggcggttccgctcctgagccccgaagcgccg
atcgtcgggaccgggatggaacgccgcgtcgtggaagacgtgggtgcggtcctcctcagc
gatgtcgagggaaaggtcgtctcggtgaccggtaccgagatcgtgatcgagcctacggcg
ggcgaggtcgagaagcggaagaggggcaagcacgagagcgggctgcgcaccctttcactc
cgaaagttcatgcgttcgaacgcgggaacctgcatcaaccagaaaccgatcgttcgagtg
ggggagatggtcaagcggggggatccgctggccgacgggccgtccaccgcgaatggcgag
ctggccctcgggcaaaatctggttgtcgccttcatgccgtggaatggatataacttcgag
gacgcgatcgtcctttccgagcggctggtcaaggaggatctgtttacgagcgtccatgtc
gacgaattcgagatcgtcgcccgcgacacgaagctgggacccgaggagattacccgggac
attccgaatgtcggggatgatgcgctcaagaatctcgggagcgacggcattgtccggatc
ggcgccgaggtcaagccgggcgacatcctcgttggcaagatcagtccagtgagcgagacc
gagctcgctccggaggagcggctgttgcgcgcgatcttcggcgacaaggcggccgacgtg
aaggactcgtcgttgcgggttccctccgggacgagcggcatcgtcatggatgtccgggtg
agcagccatcagtcgaaggcggagaaggaaaagctcggcatgagcgaagccaagcagaag
atcaaggagatcgaaggccgctacgagcagaaggaaaacgagctcaaggaagagctgacc
caggcgctctccaacatcctgctcaacgagaagattcccctcgatgtcgtagacgcggaa
accggagagatcctgattccggcaaaccgcaagatcaccaagaccctcctgcggaagatg
gccgcttgctgcgaccacatcgagatcgatcccagcccgattcgaaccaagatcttcgag
atcatcgggagcttcgagtcgaagttcgagcagttgcgcaacgataaggaaggcgagctc
gatcaagtggagagccgggaggagatcgagcccggaatcgtcaagcaggtcaaggtctac
atcgccagcaagaggaagatctcgatcggcgacaagatggccggacggcatgggaacaag
ggggtcgtctcccgcatcgttcccgtcgaggatatgccattcctgccggatggcacaccc
gtcgacatcgtgctcaatccgctgggcgtcccatcccggatgaatgtaggacaggtgctc
gagacgcacctgggcattgccgccaggaagttgggcttcgcggtcgcaacccccgtcttc
gatggggtgaaggaggaagagatccgcaaattcctgcgggaggctggactcgacgaggac
ggaaagacctatctctacgacggccgcactggagatcgctttgaccagcgggtggtcgtg
ggcgtcatctacatgatgaagctcaaccacatggtggccgacaagattcacgcccgcgcg
gtcggtccgtacgccctggtgacccagcagccgctcggcgggaaggcgcaatacggcggg
cagcgtttcggcgagatggaagtctgggccatggaggcctatggcgcagcctacacgctt
caggaaatgcttaccgtaaaatcggacgacgtttcgggaaggacgaggatctacgagaca
atcgtgaaaggggagaacttcctggaacccggtcggccggaatcgttcaacgttctggtc
aaggagctgcaagggctctgcctggatccgaagatcggcgttcggggtgcatccgagctc
gatctggcggatggcgaagcgcgaagggctcctgctggtccggaagcggcatga
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