Methanimicrococcus hongohii: MmiHf6_03940
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Entry
MmiHf6_03940 CDS
T09450
Symbol
topA_1
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mehf
Methanimicrococcus hongohii
Brite
KEGG Orthology (KO) [BR:
mehf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mehf03032
]
MmiHf6_03940 (topA_1)
03400 DNA repair and recombination proteins [BR:
mehf03400
]
MmiHf6_03940 (topA_1)
Enzymes [BR:
mehf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MmiHf6_03940 (topA_1)
DNA replication proteins [BR:
mehf03032
]
Prokaryotic type
DNA Topoisomerases
MmiHf6_03940 (topA_1)
DNA repair and recombination proteins [BR:
mehf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MmiHf6_03940 (topA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
RAD51D_N
AF1548-like_C
Zn_ribbon_recom
Spc7
Motif
Other DBs
NCBI-ProteinID:
WNY23095
UniProt:
A0AA96UZA5
LinkDB
All DBs
Position
complement(515980..518298)
Genome browser
AA seq
772 aa
AA seq
DB search
MYLIITEKDTAAKRIAAILSENKVKKVRYPKLGIETYEFNYKDEPTVVMGLSGHVVGIDF
PNEYNNWQKNSARDLIDAEIIPISTNKKIVTALKVIGKKADHVTIATDYDREGELIGVEA
LTLVQSVNPDVKFDRALYSAITPKDITHAFDNLTTVNFDLADAGHAREVIDLVWGAALTR
YISLCAGRLGKLFLSVGRVQSPTLALIVEREKEREAFIPVQYWEIEAALETKSKESFIAE
YHTNRIFEKEIADRVYSNVIVGNDAKIKAIEAKKRKEKPPIPFNTTEFYVAANAVGISVN
NAKRMYQTLYEAGFLSYPRTDSTIYPESLELRSLIEMFVGTEFDQYAKALLKIADKDGLK
PTQGKKEDPAHPPIHPVAPAKRSDMKEDEWKIYELVVRRFFATFAGEAEWDTMKVEIDIN
SEDFKSNGSRLVEEGWRWYYPYNKPEDRVLPHLEEGDLLKITSKELFDKETQPPSRYGQG
RLIRVMDDMGIGTKATRADIINKLVSRYYVHGNPLQPTNMAYSVIDTLEEYAPTIVKPDM
TKQLEADMDKISEGAISESDVLKESREMLNSIFDELEKNHEEIGKSLQSGLREDKIVGKC
QSCGSDLSIRKSKKGARFIGCNGYPECSFSLPVPRTGQVVVTDKMCDEHQMYKIKIITEG
KRPWELGCPQCNFIEWQKKLEEDAKNGIVAETSAERTKRIKKEKAAAKAEREAKAANPAE
LSDIKGLGTASLQKLNDAGIMTLSDFKSADSGKLSKETGISMKNIEKWKEVL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgattattacggaaaaggatacggccgccaagcgtatcgcggcaatcctttcg
gagaataaagttaaaaaagtccgttaccccaagctgggcattgagacgtatgagttcaac
tacaaagatgaacccacagttgtcatgggtctcagcggacacgtcgtcggaattgatttc
ccgaacgagtacaacaactggcagaaaaattcggccagagatttaatcgacgctgaaatc
ataccgatttcaacaaacaaaaaaatcgtcacggcactgaaagtgatcggcaaaaaagcg
gatcatgtcaccattgcaactgactatgaccgtgaaggggaattaatcggcgtagaagcg
ctcacgctggtccaatccgtcaatccggacgtcaagttcgatcgcgcgctttacagcgcg
attacgcccaaggacatcacgcatgcgtttgacaatttgacgaccgtgaatttcgatttg
gcagacgcggggcacgcgcgcgaagtcatcgacctcgtttggggcgcagccctcacgcgc
tacatttctctttgcgccggccgcctcggcaaacttttcttgtccgtcggacgcgttcag
tcgccgacgcttgcgcttatcgttgagcgtgaaaaagaaagagaagcttttattcctgtt
cagtattgggaaattgaagccgcgcttgaaacgaagtcgaaagaatcgtttatcgcggaa
tatcataccaatcgtatttttgaaaaagaaattgccgatcgcgtttattccaatgtgatt
gtcggcaatgacgcgaaaatcaaagcgattgaagcgaaaaagcgcaaagaaaagccgccg
atcccgttcaacacgactgaattttatgtcgcggcaaacgctgtcggcatttccgtcaac
aacgccaagcgcatgtatcaaacgctttatgaagccggttttttgtcttacccgagaacg
gacagcacaatttatccggaaagtctggaactgcgctcattgattgaaatgtttgtcggc
actgaatttgaccaatacgcaaaagcgcttcttaaaatcgctgacaaagacggtttaaag
ccgacgcagggcaagaaagaagatccggctcacccgccgattcatcctgtcgcgccggcg
aagcgatctgatatgaaagaagacgaatggaagatttacgagcttgtcgtccgccgcttc
tttgcaacgtttgcgggcgaagccgaatgggacacgatgaaagttgaaatcgacatcaac
agcgaagatttcaaaagcaacggctcccgcttggtggaagaaggctggcgctggtattat
ccttacaacaagccggaagatcgtgttttgccgcatttggaagaaggcgatcttttgaaa
atcacgagcaaagaattatttgataaagaaacgcagccgccgagccgctacggtcagggc
cgtttgattcgtgtcatggatgacatgggaatcggaacaaaagcgacgcgcgctgatatt
atcaacaaattggtttcccgttattatgttcacggaaacccgcttcagccgacgaatatg
gcttactccgttattgatacgcttgaggaatatgcgccgaccattgtgaagccggatatg
accaagcagctggaagcggatatggataaaatttcggaaggcgctatttcggaatcggat
gttttgaaagaatctcgagagatgctgaacagtatttttgacgagcttgaaaagaatcat
gaagaaatcggcaaatcgcttcagtccggtctccgtgaagataaaatcgtcggtaaatgc
cagtcctgcggttctgatttgagtattcgaaagtccaaaaaaggtgcccgatttatcggc
tgcaacggctatcccgaatgcagcttttcgcttccggttccgagaacgggacaggttgtt
gtgaccgataaaatgtgtgacgagcatcagatgtataaaatcaaaatcattactgaaggt
aagcgcccgtgggaactcggctgtccgcagtgcaatttcattgaatggcagaagaagctt
gaggaagacgcgaaaaacggcattgtcgccgaaacgtctgccgagcgcaccaagcgtatt
aaaaaagaaaaggcggcggcaaaagccgagcgcgaggcaaaagcggcaaatcccgcggaa
ctttcagacatcaaaggactcggaacggcttcgcttcaaaaactcaatgacgccggaatt
atgacgctttccgatttcaaatctgccgattccggaaaattgtcaaaagaaacaggcatc
agtatgaagaatattgagaaatggaaagaagttctttaa
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