Methanimicrococcus hongohii: MmiHf6_05350
Help
Entry
MmiHf6_05350 CDS
T09450
Name
(GenBank) hypothetical protein
KO
K03679
exosome complex component RRP4
Organism
mehf
Methanimicrococcus hongohii
Pathway
mehf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mehf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmiHf6_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mehf03019
]
MmiHf6_05350
Messenger RNA biogenesis [BR:
mehf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MmiHf6_05350
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MmiHf6_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
ECR1_N_2
KH_6
KH_1
RRP40_S1
RRP4_S1
S1
KH-I_KHDC4-BBP
NPR3
Motif
Other DBs
NCBI-ProteinID:
WNY23230
UniProt:
A0AA96UZJ4
LinkDB
All DBs
Position
complement(671754..672899)
Genome browser
AA seq
381 aa
AA seq
DB search
MDKKRIVIPGELLSDDTAMSGPGTYISGGKVYASVCGLLAQKGKLSVHPLSGPYMPKKND
LIIGYVTVVTSSNWIFDINCPYEGLLHVMEYPQRVPSEEMTEHFNIGDTVLLKVADVNSE
MKVELTYKDPVCRKLTRGRLVEVPYSKVSRIIGRSGAMISMLKSKTGCDIFVGGNGRIWM
NGDSFDMDVLMKALEKIETDARLPGLTDLTAAFIDEQYEAAGREAHDDAKRKPAAADKKT
KLKSAAKDETVNEAAAAPLIESSEAELKSLPRKSRASQEKKRKSAESEKESDGSESESGD
DNLIPAVGKSVVVGNSVENAAVGFDFIQNESTAPAGSVVKKQPAARPRLTQPEAYRQENC
TCFKSVFFIHPPVHEGNKSDR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaagagaattgtgatacccggagaattgctgtccgatgacacggcaatgtcg
ggtcccggaacgtatatttccggcggaaaagtctacgcatccgtatgcggacttctggcc
cagaaaggaaaactttctgttcacccgctttccggcccttatatgccgaagaaaaatgat
cttatcatcggttatgtgacagtcgtcacgtcatcgaattggatttttgatattaattgc
ccttatgaaggacttttgcacgtcatggaatatccgcagcgtgtcccttccgaagaaatg
accgaacatttcaacatcggtgatactgttttgctgaaagtggcggatgtcaattctgaa
atgaaagtcgaattgacatacaaagaccccgtttgcagaaagctgacgagaggacgtctt
gtcgaagtgccttattctaaagtgtcacgaattatcggacgctccggcgccatgatttca
atgctcaaatccaaaaccggctgcgacatttttgtcggcggcaacggacgcatttggatg
aacggcgattcatttgatatggatgttttaatgaaagctttggaaaaaatcgaaacagac
gcccgcctcccgggactcaccgatttaacagccgcttttattgacgaacaatacgaagct
gccggacgcgaagcgcacgatgacgcaaagcgaaaacccgccgcagccgataaaaaaacc
aaattaaaatccgctgcaaaagatgaaacggtcaatgaagcggcagctgcgccattgatc
gaatcttccgaagccgaattgaaatctcttccgagaaaatcaagagcgtctcaagaaaag
aaaaggaaatccgcggaatctgaaaaagaatctgatggatctgaatccgaatccggcgat
gacaatttaattccggctgtcggcaaatcagtcgttgtcggaaattccgttgaaaacgcc
gctgtcggttttgatttcattcaaaatgaatcaactgcgccggccggatccgttgtgaaa
aagcagcctgctgcaagaccgcgtttaacgcagcccgaagcatacaggcaggaaaactgc
acctgttttaaaagcgtcttctttatacacccgcccgttcacgaaggaaataaatcggac
agataa
DBGET
integrated database retrieval system
