Methanimicrococcus hongohii: MmiHf6_07320
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Entry
MmiHf6_07320 CDS
T09450
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mehf
Methanimicrococcus hongohii
Brite
KEGG Orthology (KO) [BR:
mehf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mehf03016
]
MmiHf6_07320
Enzymes [BR:
mehf01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MmiHf6_07320
Transfer RNA biogenesis [BR:
mehf03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MmiHf6_07320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Sen15
Motif
Other DBs
NCBI-ProteinID:
WNY23425
UniProt:
A0AA96UZX8
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All DBs
Position
898208..899284
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AA seq
358 aa
AA seq
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MKTQIKGNYVIGDAEAVSALYDAGGFGRPRDSSLQLRFTEAAYLLSRNKIEIFKNGKETD
FDSFIQFAAQQEEFFELKYIVYKDLKERGYYVQSSATDFRVYPRGSKPGKGSAKSFVFVR
SERVPITLLELTALINEAQNVRKQFILAIVDEESDITYYDVKRADAVGSFEGEMPVPFLP
EVKNKPSKAVLFKERIILADKEKADLLYKRSFFGKMMDEERLLLSLPEALYLAENNVLEL
FGMNGEKLSDEEFSKSASLIDSEFPRKYTIYKELKEKGFVPKTGFKFGTHFRVYRKVETL
DKIPHSEFLLSVVPLEYEFKLPATSGAIRLANSVRKRMIYAADLGNKREYIEFERIKM
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacgcagatcaaaggaaattatgtcatcggagacgcggaagccgtctcggcgctt
tatgatgcaggcggattcggccgtcctcgcgacagcagtcttcaattgcgttttacggaa
gccgcttaccttttgtcccgcaataaaattgaaattttcaaaaacggcaaagaaacggat
tttgattcatttattcaatttgcggcgcagcaggaagaattttttgaactcaaatacatc
gtttacaaagatttgaaagaacgcggctattatgttcaatcttccgcgaccgatttcaga
gtttatccgcgcggcagcaaacccggaaaagggtcggccaaaagcttcgtttttgtgaga
tcggaaagagtgccgataacgcttcttgaattgacggcgctgattaacgaagcgcagaac
gtgagaaaacaatttatcctcgccatcgtcgatgaagaaagcgatatcacatattacgat
gtcaagcgcgccgatgccgtcggcagttttgaaggcgaaatgcccgtgccgtttttgccg
gaagttaaaaacaagccgtcaaaagccgttttgtttaaagagcgaatcattttggcggat
aaagaaaaagccgatttgctttacaaaagatcttttttcggcaaaatgatggatgaagaa
cgccttttgctgtcgcttcccgaagcgctctatttggcggaaaataatgttttggaactt
ttcggaatgaacggcgaaaaactttccgacgaggaattttcaaaaagcgcatccctcatt
gattcggaatttccgcgaaaatatacgatttacaaagaattgaaagaaaaaggattcgtc
ccgaaaacaggctttaaattcggaacgcattttcgcgtttaccgcaaagtcgaaacactt
gacaaaatcccgcactccgaatttttactcagcgtcgttcccctcgaatatgaatttaag
ctgccggcaacatcgggtgccattcgattggcaaacagcgtccgcaaaagaatgatatac
gcggcagatctcggaaacaaacgcgaatacattgaatttgaaagaataaagatgtaa
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