Methanimicrococcus hongohii: MmiHf6_08500
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Entry
MmiHf6_08500 CDS
T09450
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mehf
Methanimicrococcus hongohii
Pathway
mehf03410
Base excision repair
mehf03430
Mismatch repair
mehf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mehf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MmiHf6_08500
03430 Mismatch repair
MmiHf6_08500
03440 Homologous recombination
MmiHf6_08500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mehf03400
]
MmiHf6_08500
DNA repair and recombination proteins [BR:
mehf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MmiHf6_08500
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MmiHf6_08500
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MmiHf6_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
WNY23541
UniProt:
A0AA96ZTS3
LinkDB
All DBs
Position
1040419..1041846
Genome browser
AA seq
475 aa
AA seq
DB search
MATETFNKLSERAELCANRLKTANTVHLVSHIDADGITSAAVMSLAFERAGIRYTAEYVK
KLDEKIMARLLEENHELLIFTDLGSAMVDFMVDNNMDAIIADHHQPNGRPENIATDSSVF
PYHMNPHLFGANGGFEISGSGVSYILANALGDNKDLAGLAIVGAIGDMQNRKYGKLVGLN
KEILEQGVEAGVLRNAPDLSLFGKQTRPIYKMLQYSSEPYLPGLTGEEESCIRFLQNAGV
GYDQREGAKLWIELSQEERVKVISALMKFCQDRGFPTHRVEELIRECYTLLTEKEGSEMR
DASEFSTLLNATGRYDKADIGVRVCMGDREEALAEARTLLSEHRKNLVNGLNFVKENGVT
QLEYIQYFYSGEEIKETIVGIIAGMATSLDGVDRKKPIIGMADSEDGIKISSRGTQDLIR
RGLNLSKAMNDVTEMVGGAGGGHDIAAGGTVPPERATEFIDLLDKYVGGQLNGKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgagacttttaacaaattaagcgaacgggcggaattgtgcgcaaaccgtctg
aaaacggcaaatactgttcatcttgtttctcacattgatgccgacggcattacatccgcg
gcggtcatgagtcttgcctttgaacgcgccggcatccgttacaccgccgaatatgtcaaa
aagctggatgaaaaaatcatggcgcgcctgcttgaagaaaatcatgaacttcttattttt
accgacctcggaagcgcaatggtcgatttcatggttgacaacaatatggatgcaatcatt
gccgaccatcaccaaccgaacgggcgccctgaaaacatcgcgacggattcgtctgttttt
ccgtatcacatgaatccgcatttgttcggcgcaaacggcggctttgaaatcagcggatca
ggcgtttcttatattttggcaaacgcgcttggcgacaacaaagatttggcaggtttggca
attgtcggcgcaatcggcgacatgcagaaccgcaaatacgggaaattggtcggcctgaac
aaagaaatattggaacaaggcgttgaagccggcgttttaagaaacgcgcccgacctttct
cttttcggaaaacagacgcgcccgatttacaaaatgcttcaatattcatcggagccgtat
ctgccgggattaacgggagaagaagaatcttgtatccgattccttcaaaacgcgggcgtc
ggctacgaccagcgtgaaggcgcgaaattatggatcgaattgtctcaggaagaacgcgtc
aaagtgatttccgcgctcatgaaattctgtcaggaccgcggttttccgacacaccgcgtt
gaagaattgattcgcgaatgctacaccttgctgacggaaaaggaaggatcagagatgaga
gatgcttcggaattttcaacgcttttgaacgcgaccggccgctatgacaaagcggacatc
ggggttcgcgtttgtatgggcgatcgtgaagaagcgctcgctgaagccagaacattgctt
tcggaacatcggaaaaatttagtcaacgggcttaattttgtgaaagaaaacggcgtgact
cagcttgaatatattcaatatttctattccggcgaagaaattaaggaaacgattgtcgga
atcattgcaggaatggcgacttctttagacggtgttgaccgcaaaaaaccgattatcgga
atggccgattcggaagacggcataaagatttcatcacgcggcacgcaggatttgattcgg
cgcggattgaatttgtcaaaagcgatgaacgatgtcacggaaatggtcggcggtgcaggc
ggcgggcacgacattgcggcaggcggaacggtgccgccggaaagagcaacggaattcatc
gatcttttagacaaatatgtcggcgggcagctgaacgggaagaaatga
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