Methanimicrococcus hongohii: MmiHf6_12040
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Entry
MmiHf6_12040 CDS
T09450
Name
(GenBank) hypothetical protein
KO
K07466
replication factor A1
Organism
mehf
Methanimicrococcus hongohii
Pathway
mehf03030
DNA replication
mehf03420
Nucleotide excision repair
mehf03430
Mismatch repair
mehf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mehf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MmiHf6_12040
03420 Nucleotide excision repair
MmiHf6_12040
03430 Mismatch repair
MmiHf6_12040
03440 Homologous recombination
MmiHf6_12040
03460 Fanconi anemia pathway
MmiHf6_12040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mehf03000
]
MmiHf6_12040
03032 DNA replication proteins [BR:
mehf03032
]
MmiHf6_12040
03400 DNA repair and recombination proteins [BR:
mehf03400
]
MmiHf6_12040
Transcription factors [BR:
mehf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MmiHf6_12040
DNA replication proteins [BR:
mehf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MmiHf6_12040
DNA repair and recombination proteins [BR:
mehf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MmiHf6_12040
MMR (mismatch excision repair)
MmiHf6_12040
DSBR (double strand breaks repair)
HR (homologous recombination)
MmiHf6_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_Ssb-like
OB_MEIOB_N
DUF3127
POT1PC
Aegerolysin
Motif
Other DBs
NCBI-ProteinID:
WNY23881
UniProt:
A0AA96V9G3
LinkDB
All DBs
Position
complement(1508929..1510383)
Genome browser
AA seq
484 aa
AA seq
DB search
MAELKEIYEKVQNLISYDDFVAKVEERKEALGGLCDDEMCARLVLSDLGISATEREVVMI
DSIDENSGNISFAAKVLTIYDPREFNRADGTVGRVATVMAGDSTGRIRISVWDSKVDAIE
SGDIKTGCSINVSGYTKRGLNGPEVHVGNNGVFALSDEEVEYEIPVRKIDEIKDGMNDLT
VLGKVLDLGQIKTFTRKDGGEGRVANMTIGDSTGTIRVSMWDDKAELVNELDIGNSVKIQ
NAYSKVNNFSQKVEISLGNSSVVEIADSEVEYEQKFLKVSEITDGMNGVNLTGVILDISD
VRTFNRKDGSEGTIGTITIGDDTGKIRVSLWDDKTIYLDEFDFGESVDVLNAYSRMNDFS
QSVELNVGSRGSVVAAENEVQYMEKFDNINDILPGKSYSVQGRVIEIGDFREFERDDGTQ
SMVSNIELEDDTGKIRVSLWGEHAEIVNSVQIGMTVRISDAFSKFGMNEEIELSAGNRTR
IAIL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcaaagaaatctatgaaaaagtacagaatttgatcagctacgacgacttt
gttgcaaaagtcgaggaaagaaaagaagctttaggcggtctttgtgatgatgagatgtgc
gcgcgtcttgttttaagcgatctcggcatttccgcaactgaaagagaagtcgttatgatc
gactccattgatgaaaacagcggcaacatttcttttgccgcaaaagttttaacgatttat
gacccgcgcgaattcaaccgcgctgacggcactgtcggccgcgtcgcaaccgttatggcc
ggcgattcgaccggaagaatcagaatttccgtttgggattccaaagtcgatgcaatcgaa
agcggcgacatcaaaaccggatgcagcattaatgtttccggctacaccaaaagaggttta
aacggtcccgaagttcacgtcggcaacaacggcgtttttgcgctttccgatgaggaagtc
gaatacgaaattcctgttcgtaaaatcgatgaaatcaaagacggcatgaacgatcttact
gttctcggaaaagttttggacctcggccagatcaaaacatttacccgcaaagacggcggc
gaaggacgcgttgcaaatatgacgattggcgactcgaccggcaccatccgtgtcagcatg
tgggatgacaaggctgaacttgtcaacgagcttgacatcggaaattccgttaagatccaa
aatgcttattctaaagtcaacaatttctctcagaaagttgaaatttcactcggcaattca
agcgttgtcgaaattgcagattctgaagtcgaatacgagcagaagtttttgaaagtttcc
gaaatcactgacggcatgaacggcgttaacctcacgggcgtcattttagacatttcagat
gtccgcacattcaacagaaaagacggcagcgaaggaacgatcggaacaatcacgatcggc
gatgacaccggtaaaatccgcgtcagtctttgggatgacaaaaccatttatttagatgaa
tttgatttcggcgaatccgttgacgttttaaacgcttattccagaatgaacgatttcagt
cagtcggttgaactcaatgtcggctctcgcggaagcgttgtcgccgctgaaaatgaagtt
cagtacatggaaaaattcgataatatcaatgacattcttccgggcaaatcttattccgtt
cagggccgcgtgattgaaatcggcgacttccgtgaatttgaaagagatgacggcacgcag
agcatggtttcaaacattgagcttgaagatgacaccggcaaaatccgtgtttcactttgg
ggcgagcacgcagaaatcgtcaacagtgtccagatcggcatgaccgtccgcatcagcgac
gctttctccaagttcggcatgaacgaggaaatcgagctgagcgccggcaacagaacaaga
attgcgattttgtaa
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integrated database retrieval system
