Methylovirgula sp. HY1: MHY1_00536
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Entry
MHY1_00536 CDS
T11446
Symbol
lptB_1
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy02010
ABC transporters
mehy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MHY1_00536 (lptB_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MHY1_00536 (lptB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mehy02000
]
MHY1_00536 (lptB_1)
Transporters [BR:
mehy02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
MHY1_00536 (lptB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
AAA_21
BCA_ABC_TP_C
AAA_27
AAA_23
AAA_29
SMC_N
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QXX73737
LinkDB
All DBs
Position
complement(566084..567934)
Genome browser
AA seq
616 aa
AA seq
DB search
MIASRKGLRTLIPEAATVLGLVVAPFILPYIGFVPDTMNRILVFGLFGIGFDLLFGYAGL
LSFGQSAFFGTGGFVAAYLLTHMGLPSVMLGLVIGTVAAAIAGYLVGLIALRRTGIYFAM
ITVAIAEVFFFMENSPLSKFTGGENGLPGVPSPTFYLGFATIHATGGWSMYGFLAFIYFA
GIVIGRRIVASPAGRIMVAIRENPLRAAAVGHNVHAYKLLAFVIAAAYAGLAGGLLGILQ
AYMPPDAFAFDTSGQLIMQTVIGGLQTLFGPLVGAAVWLYLRDILQSGLGLGASWKLVLG
VVFVLLVCFLRRGIIGGIVDLYAYLRGIGKPKRAPSVIDDARPSASQIAAALAAPPLPSR
EINDYAGPILQTKNLSKRYGGLSANSDVNFSVQAGELRGIIGPNGAGKSTFFKMLTCEIH
PSSGSIIFEGRDITGLEVTEVCQLGLTKSYQVNQLFTRLTARENITISALAEKRGSFRLD
FLRDATRVPGVEELVQHTLQLVELCGRADVPVSQLAYGEKRRLEIGLALATCPSLLLLDE
PLAGMSPRERAETVKLLKSISRGRTTIIIDHDMDALFELADRVTVLQEGRILVEGTPAEI
KGDTNVREAYLGGVLE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatagcgagccgcaaaggactccggacactgattccggaagcggcgacggtgctcggg
ctcgtcgtcgcgccattcattttgccgtatatcggcttcgtgcctgacacgatgaaccgc
attctcgtattcggtctctttgggatcggcttcgatttgctgttcggctatgccggtctt
ctgtctttcggtcagtccgccttctttggcacgggcgggtttgtcgcggcctatctgctg
acccatatgggcctgccgagcgtgatgcttggcctggtgatcggcacggtggccgccgcg
atcgccggctatctggtcggactgatcgctttgcggcgcaccggaatctatttcgcgatg
atcacggtcgccatcgccgaagtcttctttttcatggagaattcgccgctctcgaaattt
accggcggcgagaatggtttgcccggcgtaccgtcgccgaccttctatctcggctttgcg
acgatccacgccaccggcggctggtcgatgtatggctttctggcttttatctattttgcc
ggcatcgtcatcggtcgacggatcgtggcatcgccggccggccgaatcatggttgcaatc
cgcgaaaacccgctacgtgcggccgccgtcggccataatgttcacgcctataagctgctg
gccttcgtcatcgccgcggcctatgctggcctcgccggcggattgctcggcatcttacag
gcctatatgccgccggatgccttcgccttcgacacctccgggcagttgattatgcagacc
gtgatcggcggtctccaaaccttgttcgggccgctcgtcggcgccgccgtctggctctat
ctacgcgacatattgcaaagcgggctcggcctcggcgcctcgtggaagctggtgctcggt
gtcgtcttcgtcctgctcgtctgcttcttgcggcgcggcatcatcggcggcatcgtcgac
ctctatgcctatttgcgcggtatcggcaagcccaagcgcgcgccatctgtgattgacgat
gcccgccccagcgctagccagatcgccgccgccctggcagcaccaccactgccgagtcgt
gagatcaatgactatgccggcccaattcttcagacaaaaaacctgtccaagcgatatggc
ggtctttccgccaatagcgacgtcaatttctcggttcaggcgggtgagctccgcggcatc
atcggtcccaatggtgccggcaagagcacattcttcaagatgctgacctgcgagattcat
ccatcgtccggctcgatcatcttcgaaggacgcgacatcaccggccttgaagtcacagaa
gtctgccagctcggtctcacgaagagctatcaggtcaatcagctgttcacgcgcctgacc
gcgcgggaaaacatcacgatctccgctcttgccgaaaagcgcggcagttttcggctcgat
tttctacgcgatgcgacgcgcgttcccggcgttgaagagctggttcaacatacgctgcaa
ttggtcgaattatgcgggcgggccgatgttcccgtgtcgcaactcgcctatggcgagaag
cgacggctcgaaatcgggctcgccctagcgacctgcccgagtctcttgctgctcgacgaa
cctttggccggcatgagcccgcgcgagcgggcagaaaccgtcaagctcctgaaatcgatc
agccgcggccgcacgacgatcatcatcgatcacgacatggacgctttgttcgaactcgcc
gaccgcgtcacggtcttgcaggagggaaggattttggtcgaaggaacgccggccgaaatc
aagggcgataccaacgtgcgggaagcctatctcggtggagtgctcgaataa
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