Methylovirgula sp. HY1: MHY1_01141
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Entry
MHY1_01141 CDS
T11446
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy03410
Base excision repair
mehy03430
Mismatch repair
mehy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MHY1_01141 (recJ)
03430 Mismatch repair
MHY1_01141 (recJ)
03440 Homologous recombination
MHY1_01141 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mehy03400
]
MHY1_01141 (recJ)
DNA repair and recombination proteins [BR:
mehy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MHY1_01141 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MHY1_01141 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MHY1_01141 (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QXX74329
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Position
complement(1181283..1183106)
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AA seq
607 aa
AA seq
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MDESLISSKNRFFLGVERSALGRAWRDRLDLAGQARAAAMMQLHGHSDLLARVLSGRGVV
PEEAALYLDPSLRQLMPDPSTLVDMDAAAARLAAAIESGETIAIFGDYDVDGACSSALIA
DFLNAAGTPFLIHIPDRIFEGYGPNVQAIAALAAQGAKLLVTVDCGTTSHQPLAEAGKLG
LDVIVLDHHQAPEILPEALIVNPNRQDDLSGLGQLCAAGIVFMTLVATNRVLRAAGFWNP
ERPEPDLLAGLDLVALATVADVASLTGLNRAFVIKGLALMRGRARPGLRALFDVAGANGP
PKAAHLGFLIGPRINAGGRIGDAALGAKLLSLHDEIEVRQIAETLDRLNRERQAIEAGTL
EIALVEAMAAGAEAETGAAIVVAGEGWHPGIVGLVASRLKERFRKPAFAFAFDGAMGTGS
GRSMAGIDLGKAVRAAVEAGIAIKGGGHAMAAGITLARDRLDDFRAFIDASLQQAFAAAR
AGEALFIDAALTAAGANPALHTLLESAGPYGAGNPEPVFVFPAHRLVDVMPVGENHLRWR
AKAGDGASLEGILFRAVGEPLGEALKAARGESVHLAGTLMLDRWNGRERMQLRLLDLARG
EPGRRGG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggacgagtctctgatttcctcgaagaaccggtttttcctcggcgtcgagcgctccgcg
ctggggcgggcgtggcgtgaccggctggacctggcaggacaggcccgtgccgccgccatg
atgcagttgcatggccattcggatcttttggcgcgcgtgctctccggtcgcggggtcgta
ccggaggaggccgcgctctatctcgatccgagcttgcgtcaattgatgcccgacccctcg
acgctggtcgatatggatgccgccgcggcgcgccttgcggctgcgatcgaaagcggcgag
accatcgcgattttcggtgattatgatgtcgacggcgcctgctcatcggcgctgatcgcc
gactttctgaacgctgccgggacgccctttctaatccatattcccgaccggattttcgag
ggctacggcccgaatgttcaggcgatcgcggctttggccgcgcaaggcgcaaagcttctc
gtcaccgtcgattgcggcacgacgagccatcagccgctcgccgaggcgggcaagctcggc
ctcgacgtgatcgttctcgatcatcatcaggcgccggaaattttgcccgaggcattgatc
gtcaatccgaaccggcaggatgatctgtccggcctcggccagctttgcgccgccgggatc
gtgttcatgacgctcgtcgccaccaaccgggttttgcgggcggcgggtttttggaacccg
gagcggccggagcccgatcttttggcgggcctggatctcgtggctctggcgaccgtcgcc
gatgtggcgtccctcacgggtctcaaccgcgcctttgtaatcaagggtctcgctttgatg
cgggggcgggcacggccgggcctgcgcgcgctcttcgatgtggctggcgccaatgggccg
ccgaaagccgcgcacctcggctttctgatcgggccacgcatcaatgccggcggtcggatc
ggcgatgccgcgctcggcgccaaattgctttcgctgcacgacgagatcgaagtgcggcag
attgccgagacgctcgatcggctcaaccgcgaacgccaggcgatcgaagcggggacgctc
gaaatcgcgctcgttgaggcgatggcggcaggcgccgaggccgagaccggcgcggccatc
gtcgttgctggcgagggctggcatccgggcatcgtcgggcttgtcgcttcacggctcaaa
gagaggttccgcaagccggctttcgcctttgcgttcgacggcgcgatgggaaccggctcc
ggccgctccatggctggcatcgatctcggcaaggcggtgcgcgccgcggtcgaagccggg
atcgcgatcaagggcggcggccatgccatggcagccggaatcactttggcgcgcgacagg
ctcgatgatttccgagcctttatcgatgccagcctgcaacaggccttcgccgcggcgcgg
gccggggaggcgctctttatcgacgcggcgctgacggcggccggggccaatcccgcgctt
cacacgctgctcgaatcagccggaccctatggcgccggcaatcccgagccggttttcgtc
ttccccgcgcatcgcctcgtcgatgtcatgccggtcggcgaaaatcatttgcgctggcgc
gccaaagcgggtgatggggcaagtctcgaaggcattctgtttcgtgccgtgggagagccg
ctcggagaagccctcaaggcggcgcgcggcgagagcgtgcatttggcgggcacattgatg
ctcgatcgctggaacgggcgcgagcgcatgcaattgcgcctcctcgatctcgcccgcggc
gagccggggcgtaggggcggctga
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