Methylovirgula sp. HY1: MHY1_01198
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Entry
MHY1_01198 CDS
T11446
Symbol
dacF_1
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase DacF
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy00550
Peptidoglycan biosynthesis
mehy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MHY1_01198 (dacF_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mehy01002
]
MHY1_01198 (dacF_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mehy01011
]
MHY1_01198 (dacF_1)
Enzymes [BR:
mehy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MHY1_01198 (dacF_1)
Peptidases and inhibitors [BR:
mehy01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
MHY1_01198 (dacF_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
mehy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
MHY1_01198 (dacF_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Motif
Other DBs
NCBI-ProteinID:
QXX74386
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All DBs
Position
1242521..1244164
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AA seq
547 aa
AA seq
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MLKGCRVVQGRCLRSIAGFFAGLCLIATLSVSPADAWRRHRHSHHHHAHHHHFRHHARTR
VHLTHVRPGAGRTSQFAELVVDANTGRELYGVNENALRHPASITKVMTLYLLFEQLQKGR
LHLDSRIPISAHAAAQPPTKLGLRPGQTISVDNAIRAITTHSSNDMAVAVAEALGGTESN
FAVIMTRKAHELGMLRTQYVNASGLPDAGQLTTAHDLAILGRAIQERFPNYYHYFSLRSF
QFHGVAFRNHNHLLGRVPGLDGMKTGYTRASGYNLLTSVKRGKHFIIAVVLGGSTWASRD
RIMTNLIAAHIDDGSTRHTAPIFAKRHDSELAQHETESVKAAATTTPAAKPMPLAGTERT
DPMQTGTLGAPMPVARPRPAYVSAAPKPMPIEDGATNSDPGHVKRAYFDGSTERPTTSSA
TPTTLRWVVGPSPAKERMADAKPSATDESVHAAAEMPSVKSEHLAVRSGWMIQIGATDDP
AGASELLARAKAHGPHSLRRAQPFTEKIQKGSETLYRARFAGLRAETAEAACRSLKHAGF
ACFAIRD
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagggttgtcgtgtggtgcagggtcgctgcttaaggtcgatagccggcttcttt
gccgggctttgccttatcgccacgctttccgtgtctcccgcagacgcttggcgcaggcac
cgccattcacatcaccaccatgcgcatcatcatcattttcggcatcatgcgcggacgcgc
gttcaccttacgcacgtgcggccgggtgcaggtcgcacgtcgcaatttgcggaactggtc
gtcgacgccaacaccggccgcgaactttatggcgtcaacgaaaatgctctgcgccatccg
gcctcgatcaccaaggtcatgacgctctatctcttgttcgagcaattgcagaagggacgt
ctgcatctcgattcacgtattccgatttcggcgcatgccgccgctcagccgccgacgaaa
ctcgggctgcgccccggccagacgatcagcgtcgacaacgcgatcagggcgatcaccacc
cactcatccaatgatatggcggtcgcggtcgccgaggcgctcggcggcaccgaatcgaat
ttcgcggtgatcatgacgcgcaaggcgcatgaactcggcatgctgcgcacccaatatgtc
aatgcgtcgggtcttccagatgccgggcagctgacgaccgcgcatgaccttgcgatcctt
ggtcgcgccattcaggagcgcttcccgaactactatcattatttctcgctccgctccttt
caattccacggcgtcgcctttcgcaaccacaatcacctgctcggccgcgtccccgggttg
gatgggatgaagaccggctacacgcgcgcttccggctataatctcctgacttcggtgaaa
cgcggcaagcatttcatcatcgccgttgtgctcggcggttcgacttgggcgagccgcgac
cgcatcatgacgaacctcatagctgcgcatatcgacgatggttcgacgcgccatacggca
ccaatcttcgccaaacggcacgacagcgagctggcccaacacgagaccgaatcggtcaaa
gccgccgcgaccacgacgccggcggccaagccgatgcccctcgccgggaccgaacgcacc
gaccccatgcagaccggaacgctcggcgcgcccatgccggtggcgcggccacgtccggcc
tatgtctcggcagcgccgaaaccgatgccgatcgaagatggcgcaacaaattccgacccg
ggccacgtcaagcgcgcctatttcgacggctcgacggagcgtccgacgacatcgagcgcg
acgcccaccaccttgcgctgggttgtcgggccgtcgccggcaaaagaacgcatggccgat
gccaaaccatccgccaccgatgaatccgttcacgccgccgcggaaatgccgagcgtcaaa
tccgaacacttggcggtacgctccggctggatgatccagatcggcgccaccgacgacccc
gccggagcgagcgaactgctcgcgcgcgccaaagcgcatggtccccactcgctcaggcgc
gcccaacccttcaccgaaaagatccagaaaggatcggaaacgctgtatcgcgcccgtttc
gccgggctgcgcgccgagacagcggaagcggcttgtcgatcccttaaacatgccggattc
gcctgtttcgcgatccgggattga
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