Methylovirgula sp. HY1: MHY1_01876
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Entry
MHY1_01876 CDS
T11446
Symbol
cbbS
Name
(GenBank) Ribulose bisphosphate carboxylase small chain
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy00630
Glyoxylate and dicarboxylate metabolism
mehy00710
Carbon fixation by Calvin cycle
mehy01100
Metabolic pathways
mehy01110
Biosynthesis of secondary metabolites
mehy01120
Microbial metabolism in diverse environments
mehy01200
Carbon metabolism
Module
mehy_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MHY1_01876 (cbbS)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MHY1_01876 (cbbS)
Enzymes [BR:
mehy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MHY1_01876 (cbbS)
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
P3A
Motif
Other DBs
NCBI-ProteinID:
QXX75059
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All DBs
Position
complement(1950177..1950602)
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AA seq
141 aa
AA seq
DB search
MRVTQGCFSFLPDLTDDEIRTQVQYCIDKGWAVNIEFTDDPHPRNTFWEMWSMPMFDIKD
AAAVMLELDACRKAYGGRHYIRVSGFDSAHGWESVRISFLVSRPENEPGFRLVRQQMDGR
NMRYTVQSYASDQPEGDRYGA
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcacacaaggctgtttctcgttcctgccggatttgaccgacgacgagattcgc
actcaggtgcaatattgtatcgacaagggctgggcggtgaatattgaattcaccgacgat
ccgcatccccgcaatacgttttgggagatgtggagcatgccgatgttcgacatcaaggac
gccgcggcggtcatgttggagttggatgcttgccgcaaagcctatggcgggcgccactac
atccgcgtctccggcttcgattcggcgcacgggtgggagtctgtgcgaatttcgttcctg
gtctcgcgaccggagaacgagccgggcttccgtctcgtccgacagcaaatggacggccgc
aacatgcgctacacggtgcaatcctatgcgagtgatcaacccgaaggcgaccgctacggc
gcctga
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