Methylovirgula sp. HY1: MHY1_02221
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Entry
MHY1_02221 CDS
T11446
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy03030
DNA replication
mehy03430
Mismatch repair
mehy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHY1_02221 (dnaX_2)
03430 Mismatch repair
MHY1_02221 (dnaX_2)
03440 Homologous recombination
MHY1_02221 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mehy03032
]
MHY1_02221 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
mehy03400
]
MHY1_02221 (dnaX_2)
Enzymes [BR:
mehy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MHY1_02221 (dnaX_2)
DNA replication proteins [BR:
mehy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MHY1_02221 (dnaX_2)
DNA repair and recombination proteins [BR:
mehy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MHY1_02221 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_30
AAA_assoc_2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_18
nSTAND3
Sigma54_activ_2
AAA_19
SRP54
AAA_28
TsaE
Rad17
Motif
Other DBs
NCBI-ProteinID:
QXX75402
LinkDB
All DBs
Position
complement(2323064..2324926)
Genome browser
AA seq
620 aa
AA seq
DB search
MSEEDRAEAVPSLSFPDEETVAAAAAPYRVLARKYRPSSFDDLIGQEAMVKTLSNAFDLG
RIHQAYMLTGVRGVGKTTTARILARAFNYELPAQGGQPAVTKPTIHMPELGVHCQAIIES
RHVDVIEMDAASHTGIDDVREIIESIRYRPVLARTKVYIIDEVHMLSKQAFNGLLKTLEE
PPDHARFVFATTEIEKVPVTVRSRCQRFDLRRVEADVLVAHLAAICAKENVAIEPEALAL
IARAAEGSVRDALSLLDQAIAYATGAAGTIIMAADMRLMLGLADRGRIIDLFAELMAGDI
AAALTGLKELYDAGADPGQILVELAEFIHFVTRLKLLSGNVDDPTVTEDERRRGGEFAQS
LSMPVLTRAWQLLLKGMQEVKESPRPLAAADMVLVRLGYAADLPTPDEALRRISGLGAGA
AGAGQAPAGRSPSGGSPRAMAGPGGSASARQAAPVPSAAPMPSADASLPTARLSTFEDVV
ALAAKHRDIQLKMALERDVRIVRFETGSIEFSPRPGASPQLAQTLMRRLQEWTGARWMVA
ISNEAGGPSLTERNAAAAAAALQGVRALPLVGKVLDHFPGAEIIAVRNGEPAAAADPSSG
NSAEDEDVAYIDQAFTEDDL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaagaccgcgccgaagcggtgccgtctctctcttttccggatgaagagacg
gtggccgcggccgccgcgccttatcgcgtgctggcgcgcaaatatcgtccctcgagcttc
gacgatctcatcggccaagaggccatggtgaagacgctgtccaatgccttcgatctggga
cgtatccaccaagcctatatgctgaccggcgtgcgcggcgtcggcaagaccaccacagcg
cgcattctcgcccgcgccttcaattatgagctgccggcgcagggcggccagcccgcggtc
acaaagccgacgatccatatgccggaactcggcgtccattgtcaggcgatcatcgaatcg
cggcatgtcgatgtgatcgaaatggatgcggcgtcgcataccggcatcgacgatgtgcgc
gagatcatcgagagcatccgctatcggccagtcctcgcccgcaccaaggtctatattatc
gacgaagtgcatatgctgtcgaaacaggccttcaacggcctgttgaagacgctcgaagag
ccgccggaccatgcgcgattcgtcttcgcgacgacagagatcgagaaagtgccggtgacg
gtgcgctcgcgctgccagcggttcgatctgcgccgcgtcgaggcggatgtcctcgtcgcg
catctggcggcgatctgcgccaaggaaaatgtcgcgatcgagccggaagcgctggcgctg
atcgcgcgcgcggcggaaggctccgtgcgcgatgcgctgtcgctgctcgatcaagccatc
gcctatgcgacgggggcggccggcacgatcatcatggcagccgacatgcgcctgatgctc
ggcctcgccgatcgcggccgcatcatcgatctcttcgccgagctgatggccggcgatatc
gcggcggcgctcacgggcctgaaagaactctatgatgccggcgccgatccgggccagatc
ctcgtcgaactggccgaattcatccatttcgtgacgcggctcaagcttctctccggaaat
gtggacgatccgacggtcaccgaggacgagcgccggcgcggcggcgaattcgcgcaaagc
ctgtcgatgccggtgctgaccagggcttggcaactgctcttgaagggcatgcaggaggtc
aaggaatcgccacggccgctcgccgccgccgatatggtgctggtgcggctcggctatgcg
gcggatctgccgacgccggacgaggccttgcgccgcatctccggacttggcgcgggcgct
gccggggcgggacaggcgccggccggtcgttcgccgtcgggcggatcgccccgggccatg
gcgggaccgggtggatcggcgagcgcgcgccaagccgcgccggtgccttctgccgcgccc
atgccttccgccgatgcatctttgccgacggcccgcctctccactttcgaagatgtcgtg
gcgctcgcagccaagcatcgcgacatccaattgaagatggccttggagcgggatgtgcgg
atcgtccgcttcgagacgggctcgatcgaattttcgccacgccccggcgcttcgccgcaa
ctcgcgcagacgctcatgcggcgcttgcaggaatggaccggcgcccgctggatggtcgcg
atctcgaacgaggcgggaggcccgagcctgacggagcgcaatgccgccgccgcggccgcg
gccttgcagggcgtgcgggcactgcctctcgtcggcaaggtgctcgatcattttcctggc
gccgagattattgccgtgcgcaatggcgaacccgccgccgctgccgatccgtcatctggc
aattcggctgaggacgaggatgtggcctatatcgatcaggcctttacggaagacgatctc
tga
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