Methylovirgula sp. HY1: MHY1_02509
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Entry
MHY1_02509 CDS
T11446
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHY1_02509 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mehy03019
]
MHY1_02509 (groL1)
03110 Chaperones and folding catalysts [BR:
mehy03110
]
MHY1_02509 (groL1)
03029 Mitochondrial biogenesis [BR:
mehy03029
]
MHY1_02509 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mehy04147
]
MHY1_02509 (groL1)
Enzymes [BR:
mehy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MHY1_02509 (groL1)
Messenger RNA biogenesis [BR:
mehy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MHY1_02509 (groL1)
Chaperones and folding catalysts [BR:
mehy03110
]
Heat shock proteins
HSP60 / Chaperonin
MHY1_02509 (groL1)
Mitochondrial biogenesis [BR:
mehy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MHY1_02509 (groL1)
Exosome [BR:
mehy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MHY1_02509 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
MHY1_02509 (groL1)
Exosomal proteins of breast cancer cells
MHY1_02509 (groL1)
Exosomal proteins of colorectal cancer cells
MHY1_02509 (groL1)
Exosomal proteins of bladder cancer cells
MHY1_02509 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QXX75679
LinkDB
All DBs
Position
complement(2614323..2615966)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDLRFSSDARDRLLRGVEILANAVKVTLGPKGRNVVIEKSFGAPRISKDGVTVAKEI
ELADRFENLGAQLVREVASKQNDVAGDGTTTATILAASIVREGTKAVAAGLNPMDLKRGI
DLAVGAVIADLKANSKKVTSNDEIAQVGTISANGDRTVGEIISTAMQKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYLSPYFITNAEKMIVELEDPFILVHEKKLSSLQALLPVLEAV
VQTGKPLVIVAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTAGQI
ISEDLGIKLENVTLPMLGRAKRIRIDKETTTIIDGSGSKADIEARIGQIKNLIAETTSDY
DREKAQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGISPGGGVALL
RAIKVLDSVVTANGDQKTGVDIVRKAIQTPARQIVDNSGGDGAVVVGKLMENASYSYGFD
AQTGQYGDMVKFGIIDPTKVVRTALEDAASIAGLVVTTEAIITELPKKDGPAMPPGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagacctccgtttctcctccgatgcccgcgaccgtttgttgcgcggcgtc
gaaattctcgccaatgccgtcaaggtcacactcggtcccaaaggccgtaacgtcgtgatc
gaaaagtccttcggtgcgccgcgcatcagcaaggacggcgtgacggtcgccaaggaaatc
gagctcgccgaccggtttgaaaacctcggcgctcagctcgtccgcgaagtcgcctccaag
cagaatgacgtggccggcgacggcaccacgacggcgaccattctcgccgcctcgatcgtt
cgcgaaggcaccaaggccgtcgcggccggcctcaatccgatggatctcaagcgcggcatc
gacctcgccgtcggcgctgtcatcgccgatctcaaggccaattcgaagaaagtcacctcc
aatgacgagatcgcccaggtcggcacgatctcggcgaatggtgatcgcacggtcggcgag
atcatttcgaccgccatgcagaaggtcggcaatgaaggcgtaatcacggtggaagaggcc
aagagcctcgagaccgagctcgacgtcgtcgagggcatgcagttcgatcgcggctatctc
tcgccctatttcatcaccaatgccgagaagatgatcgtcgagctcgaggatcccttcatt
ctcgtgcacgagaagaagctctcgtccttgcaggccctgctgccggttctcgaagccgtc
gtgcagaccggcaagccgctcgtcatcgtcgccgaggacgtcgaaggcgaagctttggcg
accctcgtcgtcaacaagctgcgtggcggcctgaaggtcgctgccgtcaaggcgcctggc
ttcggcgatcgccgcaaggccatgctggaagacattgcgatcctcactgccggtcagatc
atttccgaagatctcggcatcaagctcgagaacgtcacgctcccgatgctcggccgcgcc
aagcgcatccgcatcgacaaggaaaccacgacgatcatcgacggctctggatccaaggcc
gacatcgaagcccgtatcggtcagatcaagaacctgatcgccgagacgacctccgattat
gatcgcgaaaaggcgcaagaacgtctcgccaagctcgctggcggcgtcgcggtgattcgc
gtcggcggcgccaccgaagtcgaagtgaaagagaagaaggatcgcgtcgacgacgcgctc
aatgccacccgcgctgcggtcgaagaaggcatatcgcccggcggcggtgtcgctcttctg
cgggccatcaaggtgctcgacagtgtcgtcaccgcgaatggcgatcagaagaccggtgtc
gatatcgtccgcaaggcgattcagactccggccaggcagatcgtcgacaattccggcggc
gacggcgccgtcgtggtcggcaagctgatggagaatgcctcctattcctacggctttgac
gcacagaccggccaatatggcgacatggtcaaattcggtatcatcgaccccaccaaggtc
gtgcgcaccgctctcgaggatgcggcctcgatcgctggtctcgtcgtcaccaccgaagcc
atcatcaccgaactgcccaagaaggatggcccggccatgcctccgggcggtggcatgggc
ggcatgggcggcatggatttctaa
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