Methylovirgula sp. HY1: MHY1_02806
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Entry
MHY1_02806 CDS
T11446
Symbol
ldc
Name
(GenBank) Lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy00330
Arginine and proline metabolism
mehy00480
Glutathione metabolism
mehy01100
Metabolic pathways
mehy01110
Biosynthesis of secondary metabolites
mehy04148
Efferocytosis
Module
mehy_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
MHY1_02806 (ldc)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MHY1_02806 (ldc)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MHY1_02806 (ldc)
Enzymes [BR:
mehy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
MHY1_02806 (ldc)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
ACT
Motif
Other DBs
NCBI-ProteinID:
QXX75972
LinkDB
All DBs
Position
complement(2914218..2915360)
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AA seq
380 aa
AA seq
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MTDRIHEFLRRRREDGREDGPCLVLDLDVVRDNYFAFAKSLPDTRVFYAVKANPDPQVIK
LLARLGSCFDTASVVEIEQVLAAGASPDRISYGNTIKKERDIARAFALGVRLFAVDCEAE
VEKIARAAPGAKVFCRLLCDNTGAEWPLSRKFGCAPALAPRVLEHAHRLGLVAYGLSFHV
GSQQRDPKSWDASLKASAEIFRDLAERGINLQMVNLGGGFPTKYLKNVPAVKTYAQTIFK
ALRKHFGNRIPETIIEPGRGMVGNAGVIEAEVVLIAKKADDDKVKWVYLDIGKFNGLAET
MDEMIRYPIRTPFDDDRMEPCVIAGPSCDSVDVLYEKEPYLLPVSLEIGSKVLIEGTGAY
TTTYSTVGFNGFPPLKSYVI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgtatccacgaatttctgcgccgccgacgcgaagacggccgagaagatggg
ccttgcctcgtcctcgacctcgacgtcgtgcgcgacaattactttgcctttgccaagagc
ctgcccgacacgcgcgtgttctatgcggtcaaggccaatcccgacccgcaggtgatcaag
ctgctggcacggctcggctcgtgcttcgacacggcctcggtggtggaaatcgagcaggtg
ctcgccgccggcgcgagcccggatcgcatcagctatggcaatacgatcaagaaagagcgc
gacatcgcccgggccttcgccctcggcgtaaggctctttgcggtcgattgcgaagccgaa
gtcgagaagatcgcccgcgccgcacccggtgcgaaagtgttctgccggctcctttgcgac
aacaccggtgccgaatggccgctgtcgcgcaaattcggctgcgcgccagcgttggcgccg
cgggtgctcgaacatgcccatcgcctcggcctcgtcgcctatgggctctccttccatgtc
ggttcgcagcagcgcgatccgaagagctgggacgcaagtctcaaggcttccgcggagatc
tttcgagacctcgccgaacgcggcatcaacttgcagatggtcaatctcggcggcggcttt
ccgaccaaatatctgaagaacgtcccggcggtgaagacctatgcgcaaacgatcttcaag
gcgttgcgcaagcatttcggcaaccgcattcccgagacgatcatcgagccgggccgcggc
atggtcggcaatgccggcgtcatcgaggcggaagtcgtgctgatcgcgaagaaggcggac
gacgacaaggtaaaatgggtctatctcgacatcggcaaattcaacggcctcgccgagacg
atggacgagatgatccgctatccgattcgcacgccgttcgacgacgaccggatggagcct
tgcgtgatcgccggaccgtcctgcgattcggtcgatgtgctctatgaaaaagagccctat
ctgctgccggtcagtctcgaaatcggctcgaaagtgctgatcgagggaaccggcgcctat
acgacgacctattccaccgtcggcttcaacggcttcccgccgctgaaatcgtatgtgatc
tga
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