Methylovirgula sp. HY1: MHY1_03189
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Entry
MHY1_03189 CDS
T11446
Symbol
cca
Name
(GenBank) CCA-adding enzyme
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mehy Methylovirgula sp. HY1
Pathway
mehy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mehy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHY1_03189 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mehy03019
]
MHY1_03189 (cca)
Enzymes [BR:
mehy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MHY1_03189 (cca)
Messenger RNA biogenesis [BR:
mehy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MHY1_03189 (cca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
EspB_PE
TetR_C_8
Motif
Other DBs
NCBI-ProteinID:
QXX76349
LinkDB
All DBs
Position
complement(3307948..3309222)
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AA seq
424 aa
AA seq
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MRAIAAPEAAKALLRDPSLIRVLTLLDGDGEEARLVGGALRNALLDRPVHECDIATTATP
ETVMARAQAAGVRAIGTGLAHGTVTLLVNGTPFEVTSLREDIETDGRHAKVRFSRDFAGD
AQRRDFTMNALSMTRRGELYDYVGGLADLEARRLRFIGAPVARIREDYLRILRFFRFAAD
YAEGPLDKAALQAAMAERDGLRRLSRERIRNEIMKLLAARRAGEVTRVFCETGLLGPLLA
SAPQPARLENLLRATADDPPDPILRLAALCVNLAEDAQRLRDYLRLSNQEHQRLERMAEA
FVPLHRASRPPPPQALLRLLFRHGRQAACDALCLAQAEAGPEFAAHWREAILYLRAAEEP
RLPFSGADLLARGVPNGRAIGIALKDLQQRWIEAGFPQDPRQLAQLLEEATRERPEDTDD
SSTA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagggccatcgccgcgcccgaggcggccaaagctctgctacgggacccatccctcatc
cgcgtcctgacgctgctcgatggcgacggcgaggaggcacgcctagttggcggcgccctg
cgcaatgccctcctcgaccggcccgtccatgaatgcgacattgccaccacggccacgccc
gagacagtgatggcacgcgcccaagccgcgggcgtgcgcgccatcgggaccggcctggcg
catggcaccgtgaccctcctcgtcaacggcacacccttcgaagtgacgagcctgcgcgaa
gacatagagaccgatggacgccatgcgaaagtccgtttcagccgcgatttcgccggcgat
gcgcaacgacgcgatttcaccatgaacgccctatcgatgacgcgccgcggcgagctttat
gactatgttggcggcctcgccgatctcgaagcgcggcggctccgcttcatcggcgctccc
gtggcccgcatccgcgaagattatctccgcattttgcggtttttccgcttcgctgccgat
tatgcggaaggaccgttggacaaggcggccttacaggctgcgatggccgaacgcgatggg
ctcagacgcctgtcacgcgaaagaatcagaaacgaaatcatgaagcttttggcggcacgc
cgcgccggtgaagtcacccgcgtcttttgcgagaccggcctgctcgggccattgctcgcg
tcggcgccgcagccagcgcggctcgaaaatctgctgcgcgcgacggcggatgatccgccg
gacccgattttgcgcctggccgcgctttgcgtgaacctagcggaagatgcgcagaggctg
cgcgattatctgcgcctgtcgaaccaggagcatcagcggctcgagcgcatggccgaagcc
tttgtaccgttacatagagcaagccggccgccaccgccgcaagctctgcttcggctcctg
tttcggcatggacggcaggcggcttgcgatgccctctgcctcgcgcaagccgaggccggg
cctgaatttgcggcacattggcgtgaagcgatcctctatctgcgcgcggcggaagagcca
cggctgcctttctccggcgcagacctcttggcgcgcggcgtacccaacggccgcgctatc
ggcatcgccttgaaagatctgcagcagcgctggatcgaggcgggattcccacaagaccca
cgccagctcgcgcaattgctcgaagaggcgacgcgcgagcgacccgaagatacggatgac
tcaagcaccgcttga
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