Methylovorus glucosotrophus: Msip34_0244
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Entry
Msip34_0244 CDS
T00943
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mei
Methylovorus glucosotrophus
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mei03032
]
Msip34_0244
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_0244
Enzymes [BR:
mei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Msip34_0244
DNA replication proteins [BR:
mei03032
]
Prokaryotic type
DNA Topoisomerases
Msip34_0244
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Msip34_0244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
zf-met
Motif
Other DBs
NCBI-ProteinID:
ACT49493
UniProt:
C6X8M3
LinkDB
All DBs
Position
complement(267508..270084)
Genome browser
AA seq
858 aa
AA seq
DB search
MSKLLIVESPSKAKTLKKYLGSDFEVLASYGHVRDLIPKNGAVDPENDYAMKYEVIDRNS
KHVDAIAKAVRASDAIYLATDPDREGEAISWHIAEILKDKKLIKDKLIKRVVFHEITKTA
VQNAIASPRDISMPLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIVE
RELEIEAFKSQEYWTIHLESKKHQHLFDARLVQLDGSKVEQFTVTNETQQAEIVGKLLLA
SAGKTTVSRVEKKQKNRSPAAPFTTSTLQQEAVRKLGFTTSRAMRIAQQLYEGIDVGNGT
VGLITYMRTDSFSMAAEAVMQIRDYIKRNFEPDYLPKSPIMYKTKAKNAQEAHEAIRPTD
ITRTPQSLKNYLTPEQFRLYEMIWKRALACQMAPAKFDAVSVDLAVGSDANLFRATGQTM
IFPGFIAVYMEGQDDAEEEAEAKLPHLETGEVLDVNKIFGDQHFTEPPPRYSEASLVKVL
EEYGIGRPSTYASIISTLQDREYVLLDKKRFTPTDVGRVVNKFLTEHFTRYVDYGFTANL
ENELDDIAEGEREWVPVLDDFWQGFNKQLLEKANIDRAEITQEDIGEACPKCGKPLHSRL
GRFGKFIGCSGYPECDYIRNTGSNAAASSEPVVMGHDAASDKDILLLNGPYGPYLQLGLP
EEGSKKKPKRVSIPKEIPLANVDLEVAMKLIALPRDLGQHPETGKKIVANIGRFGPYVNH
DGKFKSIPRSDSVFDIDLPRAVELLAQAKSGPAPLKDLGKHPTEDGNIEVYAGRYGPYVQ
HGKLRATLPSSEAPEELTMEEALALLAAKAAKEAPAKKPAAKKKTTAAKKPAAKPAAKKT
TATKKPATRAKKTAVTES
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaactgctgattgttgaatcaccatcaaaagccaaaaccctgaaaaaatatctg
ggtagcgactttgaggtccttgcctcttatgggcacgtgcgtgacctgattcccaagaac
ggcgcggtggatccggaaaatgactacgccatgaaatacgaagtcatcgaccgcaactcc
aagcatgtcgatgccatcgccaaggctgtacgggcttctgatgccatctacctcgcaacc
gacccggaccgcgaaggtgaagccatttcctggcatattgccgaaatcctgaaagacaaa
aagctgattaaggacaaactgatcaagcgcgtggtctttcatgaaattaccaaaaccgcc
gtgcagaatgcgattgccagcccgcgcgacatctccatgccgctggtcaatgcacagcag
gcacgccgcgcactggattatctggtgggcttcaatctgtcgcccctgctatggaaaaaa
attcgccgtggcctctctgctggccgcgtacagagtccggccttgcgcctgattgtcgag
cgcgagctagagattgaggcattcaagagccaggaatactggaccatccatctggaatcc
aagaaacatcagcatctgtttgacgcacgcctggtgcagctggatggcagcaaggtcgaa
cagtttacggtgaccaatgaaacgcagcaggccgaaatcgtaggcaagctgttgctcgcc
agcgcgggcaaaaccacggtcagccgtgtagagaagaaacagaaaaaccgcagtccggcg
gcgcctttcacgacgtccacgctgcaacaggaagccgtgcgcaaactggggttcaccacc
agccgcgccatgcgcattgcgcagcagctgtatgaaggtattgatgttggtaacggcacc
gtgggtctgatcacctacatgcgtacggacagcttcagcatggccgccgaggcagtcatg
cagattcgtgactacatcaagcgcaacttcgagcccgactacctgccgaagtcgcccatc
atgtacaaaaccaaggccaagaacgcccaggaagcacacgaagcgatacgtccgaccgat
atcacgcgcacaccgcaaagcctgaaaaactacctgacgcccgagcagttccgcctttat
gaaatgatctggaagcgcgcccttgcctgtcagatggcacctgccaagtttgatgccgtc
agcgtcgatctggcagtgggttccgatgccaacctgttccgcgccaccggtcaaaccatg
attttccccggctttattgccgtatacatggaaggccaggacgatgccgaggaagaagct
gaagccaagctgccgcacctggaaactggcgaagtgctggacgtgaacaagatttttggc
gaccagcatttcacagaaccaccgccacgctactctgaagccagcctggtgaaggtgctg
gaagaatatggcattggccgcccatccacctacgccagcattatctccaccctgcaagat
agagagtatgtactgctggacaagaaacgctttacaccaaccgacgtgggccgcgtcgtc
aataagttcctgaccgagcatttcacccgctatgtggattacggctttaccgccaacctc
gaaaacgagctggatgatattgctgaaggcgaacgcgaatgggtgcccgtgctggatgat
ttctggcaaggctttaacaagcagttgctggaaaaagccaatatcgaccgcgcggaaatc
acccaggaagatattggcgaagcctgccccaagtgcggtaagccattgcactcccgcctt
ggccgtttcggcaagtttatcggctgctccggctatccggaatgtgactacatccgcaat
acgggcagcaacgccgccgccagcagcgagcctgtggtcatgggtcacgatgcagcaagc
gacaaggatatcctgctactgaacggcccttacggcccttatctgcaactggggctgcca
gaagaaggcagcaaaaagaaacccaagcgcgtcagcatccccaaagaaattcctctggcg
aatgtggacctggaagtcgccatgaagctgattgccttgccgcgcgacctgggccaacac
ccagaaaccggcaagaagattgtggccaacatcggccgctttgggccgtacgttaatcac
gacggcaagttcaagtccattccacgctcggacagcgtgttcgatattgatctgccgcgc
gcggtcgaactgctggctcaagcaaaatccggcccggcgccactcaaggacctcggcaag
caccccacggaagacggcaatatcgaagtttatgcgggccgctacggcccctatgtgcag
catggcaaattgcgcgccaccctgcccagcagcgaggcaccggaagagctgaccatggaa
gaggctctggcactgctggcagccaaagccgccaaggaagccccggccaagaaaccagct
gccaagaaaaaaaccaccgctgctaaaaaaccagcggcaaagccggcagccaaaaaaacc
acggccaccaagaaaccggccacgcgtgccaagaaaacggctgtgacagaaagctaa
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