Methylovorus glucosotrophus: Msip34_0295
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Entry
Msip34_0295 CDS
T00943
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mei
Methylovorus glucosotrophus
Pathway
mei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Msip34_0295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mei03021
]
Msip34_0295
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_0295
Enzymes [BR:
mei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Msip34_0295
Transcription machinery [BR:
mei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Msip34_0295
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Msip34_0295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ACT49544
UniProt:
C6X8S4
LinkDB
All DBs
Position
312664..316902
Genome browser
AA seq
1412 aa
AA seq
DB search
MKALLDLFKQVTQEEEFDAIKIALASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMAHIELASPVAHIWFLKSL
PSRLGMVLDIALRDIERVLYFEAYIVIDPGMTPLTRGQLLTEDDYLAKVEEHGDEFNAVM
GAEAVRELLRTMDVHTEIEKLRRELGETGSEAKIKKIAKRLKVLEAFQKSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKVMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKKMALELFKPFIFHKLEVLGLATTIKAAKKKVEEEGPEVWDILEDVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTREKKAARGEGMRFANVAEVQRVYDGG
LIDLHARITVRIREFDMEVDGQKREKITRYETTVGRALLSEILPAGLPFSVIDKALKKKE
ISKLINASFRKVGIRETVIFADKLMYTGYSYATRAGISISINDMLVPPEKEQLIAAAESE
VKEIEDQYVSGLVTQGERYNKVVDIWGRAGDKVADAMMKQLREETVLDANGDAAKDENGK
VIKQESFNAIYMMADSGARGSAAQVRQLAGMRGLMAKPDGSIIETPITANFRDGLNVLQY
FISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTELDCGTTEGLVTKALVKGGEVV
EPLHDRILGRVAALDVINPENQEVVYPAGTLLTEDEVEHIDALGIDEVKVRTALTCDTRY
GICAKCYGRDLGRGKLINIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAVSRAASISQVES
KSNGIVSFTSTMRYVTNARNEQVVISRNGEAVIHDENGRERERHKVPYGATLQVTDGKQV
KAGQALATWDPHTRPIITEYAGRVKFENVEEGVTVAKQVDEVTGLSSLVVIDPKQRAGQS
KGLRPQVKLLDANGVEVKVAGGDASVNVTFQLGCIITVKDGQEVGVGEVLARIPQESSKT
RDITGGLPRVAELFEARSPKDAGMLAEVTGTVSFGKDTKGKQRLVFTDLDGVSHEFLIPK
DKHVTAHDGQVVTKGESIVDGPADPQDILRLQGREALARYIIDEVQDVYRLQGVKINDKH
IEVIVRQMLRRVRITDAGDTNFIMGEQVERADVLSENERVIAEDKRPASYEFVLLGITKA
SLSTDSFISAASFQETTRVLTEAAILGKRDELRGLKENVIVGRLIPAGTGLAYHETRKRQ
SAGVDAAPAVIEEAITEVEPQQTPAEEAAGNV
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctctattagacttatttaagcaggtaacacaggaagaagaatttgatgcgatc
aagatcgcgctggcttctcctgaaaaaatccgctcctggtcctatggcgaagttaaaaag
ccagaaaccatcaactatcgtacgttcaagccagagcgtgatggtctgttctgcgccaag
atttttggcccgatcaaggactatgaatgcttgtgcggcaagtacaaacgcctgaaacat
cgcggtgttatctgcgaaaaatgcggcgttgaagtcaccttgtccaaggtgcgtcgtgaa
cgcatggctcacatcgagctggcttcaccggtagcccatatctggttcctgaagtccttg
ccaagccgtttgggcatggtgctggatattgccttgcgcgatatcgagcgcgtgctgtac
ttcgaagcatatatcgtgattgatccaggcatgaccccgctgacacgtggtcaattgctg
acggaagacgactacctggccaaggtagaagagcacggcgatgaattcaatgccgtgatg
ggtgctgaagctgtgcgcgaactcttgcgtaccatggatgtgcatacggaaattgaaaag
ctgcgtcgtgaactgggcgaaaccggttccgaagccaagatcaagaagatcgccaagcgt
ctgaaggtgcttgaagcattccagaagtctggcatcaagcctgagtggatgattctggaa
gtgctgcctgtgctgccaccagaactgcgcccactggttcccttggacggcggccgtttc
gctacttccgatctgaacgatctgtatcgtcgcgtgattaaccgtaataaccgcctgaag
cgcctgctggaactgaaggcccctgaaatcatcgtgcgtaacgaaaagcgcatgctgcag
gaagcggttgactcgttgctggacaacggtcgtcgcggcaaggtcatgacaggcgccaac
aagcgtcctctgaagtcactggccgacatgatcaagggtaagggcggtcgtttccgtcag
aacttgctgggtaagcgcgtggactactccggtcgttccgtgatcgtggtgggtccgcag
ctcaagctgcatcagtgcggtctgccaaagaagatggctctggaactgttcaagccattc
attttccacaagctggaagtattgggtctggccacgactatcaaggccgccaagaagaag
gttgaagaggaaggtccagaagtctgggatatcctggaagacgtgattcgcgagcatccg
gtattgctgaaccgtgcacctacgctgcaccgtttgggtattcaggcatttgagcctgtg
ctgattgaaggcaaggccattcaattgcaccctctggtctgcgccgcgtttaacgccgac
tttgacggtgaccaaatggcggttcacgtacctttgagcctggaagcgcaaatggaagcc
cgcacactgatgctggcatccaacaacgtgctgtctccagccaacggcgagcctatcatt
gtgccttcgcaggatatcgtgctgggtctgtactacatgacccgcgagaaaaaagccgca
cgcggcgaaggcatgcgttttgccaacgttgctgaagttcaacgtgtgtacgatggcggt
ctgatcgatttgcacgcacgtataactgtgcgtatccgcgaattcgatatggaagttgat
ggtcagaagcgcgaaaagatcacccgttacgaaactacggttggccgtgctctgctgtcg
gaaattctgccagctggcctaccattcagcgtgattgacaaggcactgaagaaaaaagaa
atttccaagctgatcaatgccagcttccgtaaagtgggcatccgcgaaaccgttattttt
gcggacaagctgatgtacaccggttacagctatgcgacgcgtgctggtatttccatcagc
atcaacgacatgctggtaccgcctgagaaggaacagttgattgcggctgccgaatctgaa
gtcaaggaaatcgaagaccagtatgtttctggtttggtgactcagggtgagcgctataac
aaggtggtggatatctgggggcgtgccggcgataaggtcgctgacgccatgatgaagcaa
ctgcgcgaagaaaccgtgctggacgccaatggcgatgcagccaaggatgaaaatggcaag
gtcatcaagcaagagtcgtttaacgcgatttacatgatggctgactccggcgcccggggc
tctgcagcgcaggtgcgtcagctggccggtatgcgcggtctgatggcgaaaccggatggc
tccatcattgagacaccgattaccgccaacttccgtgatggcttgaacgtgttgcaatac
tttatttcaacccacggcgcccgtaagggtctggcagataccgcgctgaaaacagcgaac
tccggttacctgacgcgtcgtctggtggatgtaacgcaggatctggtggtgactgaactg
gattgcggcacgactgaaggcctggtcaccaaagcgctggtcaagggtggtgaagtagtt
gagccattgcatgaccgtattctgggtcgcgtagccgcgctggatgtgatcaatcctgaa
aatcaggaagtggtttaccctgctggtacattgctgacagaagatgaagttgagcatatc
gatgccctgggcattgatgaagtcaaggtgcgtactgcgctgacttgcgatacacgctac
ggtatttgcgctaaatgctacggtcgtgacttgggtcgcggcaagctgatcaatatcggc
gaagctgtcggtgtgatcgcggcacaatctattggtgagcctggtactcagctgaccatg
cgtactttccacatcggtggtgcggtatcgcgtgcggcttctatcagtcaggtagaaagc
aagtccaacggtattgtcagcttcacttcaaccatgcgttatgtgaccaatgcccgtaat
gagcaagtggtgatttcgcgtaacggtgaagccgtgattcacgacgaaaatggtcgtgag
cgcgagcgtcataaagtgccttatggtgcgacgctgcaagtgacagatggcaagcaagtg
aaggctggtcaggctctggctacctgggatccgcatacccgtccgatcattacggaatac
gctggtcgtgtgaagtttgaaaacgtcgaagaaggtgtgaccgttgccaagcaggtagat
gaagtcactggtttgtcctccctggtggttattgatcccaagcaacgtgctggtcaatcc
aagggcttgcgtccgcaggtgaagttgctcgatgccaatggtgttgaagtcaaggttgcc
ggtggcgatgcctctgttaacgtgacattccagctgggttgcatcattaccgtgaaggat
ggccaggaagtaggcgtgggtgaagtactggcgcgtatcccgcaagagtcttccaagacc
cgtgatattaccgggggtctgccacgcgttgccgagctgtttgaagcacgttcgcctaaa
gatgctggcatgctggcggaagttaccggtactgtttccttcggtaaggacaccaagggc
aagcaacgtctggtcttcaccgacctggatggtgtatcccatgagttcctgattcctaag
gacaagcacgtgacggcgcatgacggtcaagtcgtgactaagggtgaaagcattgttgac
ggtccggcagatccgcaggatatcctccgtctgcaaggtcgtgaggcattggcccgctac
atcatcgatgaagtgcaggatgtgtatcgtctgcaaggcgttaagatcaatgacaagcac
atcgaagttattgtgcgtcagatgttgcgtcgtgtacgtatcaccgatgctggcgatacc
aacttcatcatgggtgaacaggttgagcgtgcggatgtgttgtcggaaaacgaacgcgtc
attgcagaagacaagcgtccagccagctatgagtttgtcttgctgggtattaccaaggca
tcgctgtcgacagattcgttcatttctgccgcttccttccaggaaacgacacgcgtactt
accgaggctgcaatccttggcaagcgcgacgaactgcgcggtctgaaagaaaatgtgatt
gttggccgtctgattcctgcaggtacagggctcgcatatcacgaaacacgcaagcgtcaa
tcggccggggtggatgcagcaccagccgttatcgaggaagcgattactgaagttgaaccg
cagcaaacaccagcagaagaagccgctggaaatgtatag
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integrated database retrieval system
