Methylovorus glucosotrophus: Msip34_0393
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Entry
Msip34_0393 CDS
T00943
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mei
Methylovorus glucosotrophus
Pathway
mei03420
Nucleotide excision repair
mei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Msip34_0393
03430 Mismatch repair
Msip34_0393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_0393
Enzymes [BR:
mei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Msip34_0393
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Msip34_0393
MMR (mismatch excision repair)
Other MMR factors
Msip34_0393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_22
DUF6158
Motif
Other DBs
NCBI-ProteinID:
ACT49641
UniProt:
C6X921
LinkDB
All DBs
Position
complement(402777..404939)
Genome browser
AA seq
720 aa
AA seq
DB search
MNAQHPSTSLLEGLNDKQLEAVTLPHQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPNG
LLAVTFTNKAAKEMLTRLSAMLPINVRGMWAGTFHGLCNRLLRAHHREALLPATFQILDT
ADQLSSIKRLMKQMNVDDEKFPPKQVMGYINSCKEEGLRANAVDAYDAHSQRMREIFEEY
DRQCQREGVVDFAELLLRCYELLSRDASIRQHYQSRFKYILVDEFQDTNRLQYLWLKLLA
GADNCVFAVGDDDQSIYAFRGARVGNMRDFEQDFNVRNIVKLEQNYRSHGNILDAANAII
THNRNRLGKNLWTSAGKGEPIRVYQAYNDIDEANFIVDEIKSLHSEGTELSEIALLYRSN
AQSRVLEHALFSAGLPYRVYGGLRFFERAEIKHALAYLRLIANPNDDTALLRVINFPTRG
IGARSLEQLQEAARAEDCSLWQAAINKVGNGRPGKGVEGFVALIRQMAEEATGLTLPEMA
EIATTLSGLRTHYQNEKEGEDRIANLDELISAAVTFVNNNEDAGTLTDFLTFASLEAGEH
QAEVGRDALQLMTVHAAKGLEFRTVFISGLEEGLCPHEQSLYETNGLEEERRLMYVAVTR
ARQRLYLSHAQSRMLHGQVRYGISSRFLDEIPEALLKRLNTRASPGRGGYGESPVSQTAT
SSEQKNSMPWKIGQAVAHSKFGQGVVVNYEGNANDMRVQVNFGSEGMKWLMLEYAKLEKV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacaacacccctctacctctctgctcgaaggcctgaacgacaagcaactggag
gcggtcacgctgccgcaccaatctgccctgatccttgccggcgcgggcagcggcaaaacc
cgggtactgacgacgcgcattgcgtggctgatccagaccggacaagtatcgcccaatggt
ttgctggcggtgacctttaccaataaagcggccaaggaaatgctgacgcggctttccgcc
atgctgccgatcaatgtgcgcggcatgtgggcaggtacattccatggcctgtgcaaccgt
ttgctgcgcgcgcatcatcgcgaagccctgctgcctgctaccttccagattctggacacc
gccgaccagttatccagcatcaagcgcctgatgaagcagatgaatgtggatgatgaaaag
tttccacccaagcaggtcatgggctatatcaacagctgcaaggaagaaggcttgcgggcg
aatgcggtggatgcctatgacgcgcactcacagcgcatgcgggagatttttgaagagtat
gaccgccagtgccagcgtgaaggcgtagtcgattttgccgagctgctgctgcgctgctat
gagctgctgagccgcgatgccagcatacgccagcactaccagagccgcttcaaatacatt
ctggtcgatgagtttcaggataccaatcgcctgcaatacctctggctgaagctgctggcc
ggggcggacaattgcgtgtttgccgtaggcgatgacgaccagtcgatttatgccttccgc
ggcgcgcgtgtgggcaatatgcgcgactttgagcaagactttaatgtgcgcaatatcgtc
aagctggaacagaactaccgctcgcacggcaatatcctggatgccgccaacgccatcatc
acccataaccgcaaccgcctgggcaagaacctgtggacctcggctggcaagggcgagccg
atacgcgtgtatcaggcttacaacgatattgatgaagccaactttatcgtcgatgaaatc
aaatccctgcacagcgaaggcaccgagctgagcgagatcgccctgctctatcgctccaat
gcccagtcacgggtgctggagcatgcgctgttttcagctggtctgccttatcgcgtttac
ggcggcctgcgcttttttgaacgcgccgaaatcaagcatgcgctggcctatctgcgcctg
attgccaacccgaacgacgacaccgcattgctgcgcgtgatcaactttcctacccgtggc
ataggcgcccgcagcctggagcaattgcaggaagccgcacgcgccgaagactgcagcctg
tggcaggccgccatcaacaaagtgggcaatggtcgcccaggcaaaggggtggaagggttc
gtcgcgttgatccggcagatggctgaggaagccacgggcctgactctgccagaaatggcc
gagattgccaccacgctctccggcctgagaacccattaccagaatgaaaaggaaggcgaa
gaccgtatcgccaatctggatgaattaatctcggcggctgtcaccttcgtcaataacaat
gaggatgccggcactctgacggacttcctgacctttgccagcctcgaagcgggtgaacat
caggcagaagtcggccgcgatgccttgcagctgatgaccgtgcatgccgccaaagggctg
gagttccgcacggtatttatcagcgggctggaagaaggcttgtgcccgcatgagcaaagc
ctgtatgaaacgaatggcctggaagaagaacgacgcctgatgtacgtggccgtgacgcgc
gcgcgccagcgtctttatctgagccacgcgcaaagccgcatgctgcacggtcaggtacgc
tacggtatttcatcgcgctttctggatgaaatacccgaggccttgctgaagcgcctgaat
acccgcgccagccctggccgcggtggctatggcgagtcgccagtatcgcaaaccgccacc
agcagcgagcagaaaaacagcatgccatggaaaataggccaggccgtagcccacagcaaa
tttgggcaaggcgtggtcgtcaattacgaaggcaacgccaacgacatgcgggtacaagtg
aactttggcagcgaaggcatgaaatggctcatgctggaatacgccaagctggaaaaggta
taa
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