Methylovorus glucosotrophus: Msip34_0407
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Entry
Msip34_0407 CDS
T00943
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mei
Methylovorus glucosotrophus
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mei03032
]
Msip34_0407
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_0407
Enzymes [BR:
mei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Msip34_0407
DNA replication proteins [BR:
mei03032
]
Prokaryotic type
DNA Topoisomerases
Msip34_0407
DNA repair and recombination proteins [BR:
mei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Msip34_0407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACT49655
UniProt:
C6X935
LinkDB
All DBs
Position
complement(420718..421842)
Genome browser
AA seq
374 aa
AA seq
DB search
MPDTPLDECTVQLNDALGAELHGDMALSAEAARLRYVNDGTPGFARKRTAKGFRYVDRQG
RPLHEKTHLARIRALAIPPAWQDVWICPYANGHIQATGVDAKGRKQYRYHKEWRAIRDEA
KYAHMLDFALHLPLIREQVDADLARPGLCREKVLALVIALLEKTMIRVGNDEYARTNRSF
GLTTLRNRHVDVQGGRIAFHFRGKSRVEHAIELQNARLARLVRKMKDLPGQALFQYVDDA
GERHAVSSSDVNAYLKSITGRDYTAKDFRTWSGTLHTFQSLTTLDAFENQTQAKKNVVQA
ITEAARKLGNTPTICRKCYVHPLIIETYMAGKLLEAVEQETTDKDAPWALDAIERHVLHL
LQRQIADARKSEAA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataccccgcttgatgaatgtacggtacagctcaacgacgcccttggcgccgaa
ttgcatggcgacatggcgctctctgccgaagctgcgcggctgcgttatgtgaatgacggc
acgcccggctttgcccgcaagcgcacggccaagggctttcgttatgtggatcggcaaggc
cgccccttgcatgaaaaaacgcatctggcgcgcatccgggcgcttgccattccgcccgcc
tggcaagacgtgtggatatgtccgtatgccaatgggcacatacaagccaccggggtagat
gccaaaggtcgcaagcagtaccgctaccacaaggagtggcgcgccatccgcgatgaagcc
aaatacgcgcacatgctggatttcgccctgcatctgccgctgatacgcgaacaggtagat
gccgaccttgccaggcccgggttgtgccgggagaaagtgctggcgctggtcatcgccctg
ctggaaaaaaccatgatacgggtcgggaatgatgaatacgcccgcaccaatcgctccttt
ggcctcaccaccctgcgcaaccgccatgtggatgtacaaggcggccgcatcgcctttcac
ttccgtggcaaaagccgggtggaacatgccatcgaattgcagaacgccaggctcgccaga
ctggtgcgcaagatgaaagacctgcccgggcaagcgctgtttcagtatgtggatgacgcc
ggtgaacgccatgcggtgagttcatcggacgtgaatgcctatctcaaaagcatcaccggt
cgcgactataccgccaaggatttcagaacctggtctggcaccttgcatacctttcaatcg
ctcaccacgctggatgcctttgaaaaccagacccaggccaaaaagaatgtggtgcaggcc
atcaccgaagccgcccgcaagctgggcaatacccccaccatctgccgcaagtgttatgtg
cacccgctgattatcgaaacctatatggcggggaaattactggaggccgtagagcaggaa
actacggataaggatgcaccatgggcgctggatgccattgagcggcatgtgctgcatttg
ctgcaacggcagatagccgatgcacgaaaaagcgaagcggcctga
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