Methylovorus glucosotrophus: Msip34_0492
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Entry
Msip34_0492 CDS
T00943
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mei
Methylovorus glucosotrophus
Pathway
mei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Msip34_0492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mei03400
]
Msip34_0492
Enzymes [BR:
mei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Msip34_0492
DNA repair and recombination proteins [BR:
mei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Msip34_0492
Prokaryotic type
Msip34_0492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
EAD9
Motif
Other DBs
NCBI-ProteinID:
ACT49740
UniProt:
C6X9C0
LinkDB
All DBs
Position
complement(516047..516706)
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AA seq
219 aa
AA seq
DB search
MHSPETIPSAWAERLPELAQQYASIREQLRDETDIRPRPGLWFEALRAVNPQEARVVILG
QDPYHGEDHGIQQAHGLAFSVPAGVRPPPSLRNILKELASDMGEAHIEGGNLSNWSKQGV
LLLNASLTTRGGEAGAHAAYWHAFTEKLMTWLGQREQPLVFILWGSHAQRHKSLIAPQHQ
IIESVHPSPLSAHRGFFGSRPFSQTNAVLAEWGQTPIHW
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcattcccctgaaaccatcccatccgcctgggccgagcgactaccagaactggcacag
caatatgccagcattcgcgagcaactgcgtgatgaaaccgatatacgtccgcggcccggc
ctgtggtttgaggcattgcgcgcagtaaacccgcaagaggcgcgcgtcgtcattctcggc
caggatccctatcacggggaggaccatggcatacagcaggcgcatggcctggcgttttcg
gtgcctgcaggtgtgcgcccgccgccgtctctgcgcaatatcctcaaggaactggcgagc
gatatgggcgaagcgcatattgaaggcggcaacctcagcaactggagcaagcagggcgtg
ctgctgctgaatgcctcgctgacgacgcgcggcggtgaagctggcgcgcatgcggcctac
tggcatgcgtttactgaaaagctaatgacctggctgggccagcgtgagcagcccctggta
ttcatcctctggggcagccatgcgcaacgccataagtccctgatcgccccgcagcaccag
atcatcgaatccgttcacccatcgccgctttccgcgcaccgcggattttttggcagccga
ccattcagccagaccaacgccgtgctggccgagtgggggcaaacgcccatacactggtga
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